GATK

Best practice for variant calling on Ion Torrent data with GATK
Posted in Ask the team | Last updated on 2012-10-16 21:22:21

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Hi,

I wonder how well GATK works with Ion Torrent data. Is there any recommended practice to handle Ion Torrent data, especially SNP and indel calling, with GATK?

Thanks, XZ


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There are 5 comments on this article. To see them or add your own, view this post on the forum