Best practice for variant calling on Ion Torrent data with GATK
Posted in Ask the GATK team | Last updated on 2012-10-16 21:22:21

Comments (5)


I wonder how well GATK works with Ion Torrent data. Is there any recommended practice to handle Ion Torrent data, especially SNP and indel calling, with GATK?

Thanks, XZ

Return to top Comment on this article in the forum