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TandemRepeatAnnotator

Annotates variants that are composed of tandem repeats

Category Variant Annotations

Annotation type StandardAnnotation


Overview

This tool outputs the number of times the tandem repeat unit is repeated, for each allele (including reference).

Caveat

This annotation is currently not compatible with HaplotypeCaller.


See also Guide Index | Technical Documentation Index | Support Forum

GATK version 2.5-2-gdb4546e built at 2013/05/01 09:32:36.