A set of genomic annotations based on the output of the SnpEff variant effect predictor tool
See http://snpeff.sourceforge.net/ for more information on the SnpEff tool.
For each variant, this tool chooses one of the effects of highest biological impact from the SnpEff output file (which must be provided on the command line via --snpEffFile filename.vcf), and adds annotations on that effect.
GATK version 3.0-0-g6bad1c6 built at 2014/03/06 06:38:04. GTD: NA