Documentation

LowMQ

Triplet annotation: fraction of MAQP == 0, MAPQ < 10, and count of all mapped reads

Category Variant Annotations

VCF Field INFO (variant-level)


Overview


See also Guide Index | Tool Documentation Index | Support Forum

GATK version 3.2-2-gec30cee built at 2014/07/17 17:54:48. GTD: NA