U-based z-approximation from the Mann-Whitney Rank Sum Test for base qualities
This tool calculates the u-based z-approximation from the Mann-Whitney Rank Sum Test for base qualities(ref bases vs. bases of the alternate allele).
The base quality rank sum test can not be calculated for sites without a mixture of reads showing both the reference and alternate alleles.
See also Guide Index | Technical Documentation Index | Support Forum
GATK version 2.5-2-gdb4546e built at 2013/05/01 09:32:36.
