Documentation

ReadStrandFilter

Filters out reads whose strand is negative or positive

Category Read Filters


Overview


Command-line Arguments

ReadStrandFilter specific arguments

This table summarizes the command-line arguments that are specific to this tool. For more details on each argument, see the list further down below the table or click on an argument name to jump directly to that entry in the list.

Argument name(s) Default value Summary
Optional Flags
--filterPositive
 -fp
false Discard reads on the forward strand

Argument details

Arguments in this list are specific to this tool. Keep in mind that other arguments are available that are shared with other tools (e.g. command-line GATK arguments); see Inherited arguments above.


--filterPositive / -fp

Discard reads on the forward strand

boolean  false


See also Guide Index | Tool Documentation Index | Support Forum

GATK version 3.1-1-g07a4bf8 built at 2014/03/18 07:00:36. GTD: NA