SNP Map Table: 129/Sv v.s. C3H/HeJ

Unassigned SNPs are included in the FTP tables

Chromosome
GenDist(avg)
FragmentSourceGenDist
SnpPosGt:129/SvGt:C3H/HeJ
Chr1
5.5 P
36.MMHAP69FLD6.seqrandom6.6 P to 4.4 P
94AG
17.5 F
05.MMHAP9FLB2.seqrandom17.5 F
108CT
25.1 P
24.MMHAP29FRH9.seqrandom25.1 P
130CT
51.4 F
Results_ER_9_1_95_3_5.seqrandom51.4 F
112AG
54.6 F
41.MMHAP6FLF5.seqrandom54.6 F
123GA
57.9 F
19.MMHAP66FLG1.seqrandom57.9 F
66GA
MHAa27a6.seqrandom57.9 F
67TC
66.7 F
10.MMHAP84FLD1.seqrandom66.7 F
86TC
73.2 P
07.MMHAP61FRC7.seqrandom73.2 P
117GT
20.MHAa96b8.seqrandom73.2 P
96CT
D1Mit31.1genetic marker73.2 P
26TC
74.3 P
16.MMHAP84FRF7.seqrandom74.3 P
102GA
75.4 F
43.MMHAP26FRG10.seqrandom75.4 F
106GA
Chr2
7.7 P
U22339est7.7 P
140CG
48.65 F
Z17804est49.2 P to 48.1 F
55TC
50.3 F
33.MMHAP63FLC6.seqrandom50.3 F
52GA
D43796est50.3 F
28TC
115GA
51.4 F
01.MMHAP26FRA7.seqrandom50.3 P to 52.5 F
68TA
01.MMHAP6FLA1.seqrandom51.4 F
119GA
51.95 F
D38218est52.5 P to 51.4 F
38CT
52.45 P
34.MMHAP46FRD10.seqrandom40.4 P to 64.5 P
40GA
52.5 F
44.MMHAP79FLG5.seqrandom52.5 P to 52.5 F
164GA
46.MMHAP59FLH4.seqrandom52.5 F
124AT
59.0 F
11.MMHAP44FRD8.seqrandom59.0 F
28GA
11.MMHAP87FRD8.seqrandom59.0 F
50CT
27.MMHAP25FLA6.seqrandom59.0 F
131TC
59.55 F
X80169est59.0 F to 60.1 F
81TC
66.7 F
13.MMHAP61FRE7.seqrandom66.7 F
46AC
27.MMHAP59FLA6.seqrandom66.7 F
65GA
138GA
D2Mit404.1genetic marker66.7 F
24GA
70.58879 F
M55669est74.47758 P to 66.7 F
53AG
72.1 F
D2Mit284.4genetic marker72.1 F
59CT
78.15 F
26.MHAa77c2.seqrandom77.6 F to 78.7 F
42GA
98.4 F
24.MMHAP91FLH3.seqrandom98.4 F
49TC
U09421est98.4 F
60GA
101TC
Chr3
9.679 P
11.MMHAP26FRD8.seqrandom9.679 P
99CT
125GT
L11316est9.679 P
158AG
25.1 F
35.MMHAP59FLD5.seqrandom25.1 F
58GA
25.1 P
D3Mit52.2genetic marker25.1 P
65GA
36.1 F
D3Mit157.2genetic marker36.1 F
82CT
40.4 F
34.MMHAP22FRD10.seqrandom40.4 F
109TC
42.6 F
X92122est42.6 P to 42.6 F
49GA
44.8 F
24.MMHAP9FLH3.seqrandom44.8 F
132TC
47.0 F
D3Mit195.2genetic marker47.0 F
35GA
76AG
50.85 F
MHAa82d4.seqrandom51.4 F to 50.3 P
115GC
Chr4
23.0 P
09.MMHAP37FRC9.seqrandom23.0 P
96TC
30.6 P
17.MMHAP91FLF2.seqrandom30.6 P
20GA
126TA
31.15 F
34.MHAa65T_M13Rev.seqrandom30.6 F to 31.7 F
149CA
39.3 F
MHAa78e1.seqrandom39.3 F to 39.3 P
149CT
50.3 F
D17899est50.3 F
70TA
52.5 F
37.MMHAP88FRE10.seqrandom52.5 F
138CT
59.0 P
37.MMHAP33FRE10.seqrandom59.0 P
68CA
61.2 F
U51112est61.2 F
52CT
71.0 P
27.MMHAP7FRA12.seqrandom71.0 P
64GA
X78339est71.0 P
111AG
Chr5
0.0 F
MHAa7d3.seqrandom0.0 F
112GT
131AT
4.4 F
D5Mit179.1genetic marker4.4 F
46CA
88TC
5.5 F
36.MMHAP17FRD12.seqrandom5.5 F
85CA
18.6 F
03.MMHAP95FRA9.seqrandom18.6 F
21CT
MHAa52c2.seqrandom18.6 F
100GA
121GA
18.6 P
MHAa84d6.seqrandom18.6 P
95TG
128AG
25.1 F
33.MMHAP28FLC6.seqrandom25.1 F
122TC
25.65 F
MHAa35a12.seqrandom25.1 F to 26.2 F
126CT
27.3 F
D43963est27.3 F
80TC
160AG
32.8 P
M86829est32.8 P
60CT
128GA
37.75 F
L23801est37.2 P to 38.3 F
135GT
40.4 F
12.MMHAP17FRD9.seqrandom40.4 F
23CT
48.65 F
08.MMHAP59FRC8.seqrandom48.1 F to 49.2 F
57GA
49.23689 P
mHAa21e7.seqrandom54.77378 P to 43.7 P
154AG
77.6 P
11.MMHAP20FRD8.seqrandom77.6 P
28GA
81.37419 F
U28724est76.5 F to 86.24838 P
35AG
Chr6
3.3 F
06.MMHAP84FRB9.seqrandom3.3 F to 3.3 P
64GA
M60493est3.3 F
63AG
110GA
MHAa82a9.seqrandom3.3 F
121CT
3.3 P
03.MMHAP86FRA9.seqrandom3.3 P
38CA
12.0 P
L08757est12.0 P
162AG
18.6 F
29.MHAa92c5.seqrandom18.6 F
21CT
36AT
32.MMHAP88FLC5.seqrandom18.6 F
49AG
31.7 P
D6Mit365.3genetic marker31.7 P
48AT
40.4 F
20.MMHAP85FLG2.seqrandom40.4 P to 40.4 F
53CT
137GA
MHAa54c9.seqrandom40.4 F to 40.4 P
128GA
42.6 F
44.MMHAP85FLG5.seqrandom41.5 F to 43.7 F
63AG
43.7 P
44.MMHAP27FRG11.seqrandom43.7 P
123CT
45.9 P
15.MHAa10f3.seqrandom45.9 P
90TC
47.0 F
28.MMHAP6FRB10.seqrandom47.0 F
62CT
118CA
30.MMHAP30FLB6.seqrandom47.0 F
131TC
32.MMHAP4FRC11.seqrandom47.0 F
119TC
49.2 F
16.MMHAP67FLF1.seqrandom49.2 F
49CT
85AC
63.4 F
03.MMHAP54FRA9.seqrandom63.4 F to 63.4 P
52GT
35.MMHAP94FLD5.seqrandom63.4 F to 63.4 P
104CT
66.7 F
M23236est66.7 F to Tel
98TA
Chr7
5.5 F
M21856est5.5 F
103TA
12.0 F
26.MMHAP57FLA5.seqrandom12.0 F
106TC
33.MMHAP5FLC6.seqrandom12.0 F
77AG
MHAa20d2.seqrandom12.0 F
95AC
13.1 F
15.MMHAP34FLE3.seqrandom13.1 F
21TA
132AG
18.6 F
D7Mit27.2genetic marker18.6 F
73AT
D7Mit28genetic marker18.6 F
58TA
80AG
100CT
D7Mit29genetic marker18.6 F
150TC
X94616est18.6 F
51TC
18.6 P
D19306est18.6 P
143CT
21.3 F
U28217est18.6 F to 24.0 P
141GA
21.35 F
20.MMHAP7FLG2.seqrandom20.8 F to 21.9 F
54TA
25.1 F
23.MMHAP64FLH2.seqrandom25.1 F
62CT
125CT
25.1 P
D7Mit195.2genetic marker25.1 P
67GA
26.2 F
04.MMHAP71FRB7.seqrandom26.2 F
111AG
117GA
139AG
12.MMHAP70FRD9.seqrandom26.2 F
44CT
80CG
14.MMHAP22FRE8.seqrandom26.2 F
38TC
33.MMHAP27FRC12.seqrandom26.2 F
77GT
MHAa54e9.seqrandom26.2 F
37TC
29.5 F
36.MHAa92g12.seqrandom29.5 F
72CA
30.6 F
D63644est30.6 F
60CT
Results_ER_8_28_95_1___169.seqrandom30.6 F
23GT
48AG
33.9 F
20.MMHAP4FRG8.seqrandom33.9 F
40GA
126CT
21.MMHAP61FLG3.seqrandom33.9 F
84AG
35.0 P
MHAa54h10.seqrandom35.0 P
57GA
89AG
37.2 F
26.MMHAP94FLA5.seqrandom37.2 F
55TC
63AG
75GA
40.95 F
41.MMHAP64FLF5.seqrandom39.3 F to 42.6 F
45TC
91TC
41.5 F
31.MMHAP26FRC10.seqrandom41.5 F
40TG
76AG
36.MMHAP70FLD6.seqrandom41.5 F
46CG
67GA
42.6 F
46.MMHAP57FLH4.seqrandom42.6 F
71CT
133GT
43.7 P
22.MMHAP75FRH7.seqrandom43.7 P
54AG
49.2 P
21.MMHAP6FLG3.seqrandom49.2 P
74CT
49.75 P
07.MMHAP85FRC7.seqrandom49.2 P to 50.3 P
73AG
142TC
Chr8
0.55 P
28.MMHAP45FLB4.seqrandom0.0 P to 1.1 P
107AG
111GT
MHAa28g7.seqrandom0.0 P to 1.1 P
72GA
2.75 P
MHAa54e7.seqrandom1.1 P to 4.4 P
172GA
4.4 F
11.MMHAP87FLD2.seqrandom4.4 F
26GA
46.MHAa63h10.seqrandom4.4 F
63AG
109AG
31.7 F
01.MMHAP58FLA1.seqrandom31.7 F
43AC
35 F
U13838est35.0 F to 35.0 P
25AG
41.5 F
23.MMHAP27FRH8.seqrandom41.5 F to 41.5 P
106TC
128AG
44.8 F
36.MMHAP61FRD12.seqrandom44.8 F
31TC
73.75 F
14.MMHAP71FRE8.seqrandom73.2 F to 74.3 F
46TG
Chr9
4.4 P
19.MMHAP29FRG7.seqrandom4.4 P
31AG
17.5 P
11_27_36iis.seqrandom17.5 P
53CA
20.8 F
Y00635est20.8 F to 20.8 P
135GA
39.3 F
X99273est39.3 F to 39.3 P
29CT
57.9 F
01.MMHAP90FRA7.seqrandom57.9 F
33CT
96TC
57.9 P
D9Mit14.1genetic marker57.9 P
25GA
42GA
119AC
142GA
Chr10
0.55 F
43.MMHAP61FRG10.seqrandom0.0 F to 1.1 P
126GT
5.5 F
21.MMHAP26FLG3.seqrandom5.5 F to 5.5 P
31TC
42GA
68AG
8.7 F
41.MMHAP61FRF11.seqrandom8.7 F
30CT
16.4 F
L10106est16.4 F
140GA
21.9 F
38.MMHAP75FRE11.seqrandom21.9 F to 21.9 P
35TC
47.0 P
28.MMHAP15FLB4.seqrandom47.0 P
128TC
MHAa67d12.seqrandom47.0 P
67TC
63.4 P
14.MMHAP61FLE2.seqrandom63.4 P
28TC
D16333est63.4 P
39CT
Chr11
2.2 F
09.MMHAP48FLC3.seqrandom2.2 F
100AC
9.8 F
03.MMHAP34FRA9.seqrandom9.8 F
20CT
34TC
10.9 F
Results_ER_9_1_95_3_31.seqrandom10.9 F
137CT
12 F
MHAa67b4.seqrandom10.9 F to 13.1 F
46CT
13.1 F
46.MMHAP86FRH10.seqrandom13.1 F
20TC
30.6 F
06.MMHAP36FRB9.seqrandom29.5 F to 31.7 F
20GA
75AG
165TG
31.7 F
06.MMHAP23FLB3.seqrandom31.7 F
160TC
X80417est31.7 F
48TC
39.3 F
22.MMHAP12FRH7.seqrandom39.3 F
109TC
MHAa67c11.seqrandom39.3 F
26TA
43.7 F
38.MMHAP58FLE5.seqrandom43.7 F
56CT
40.MMHAP37FRF10.seqrandom43.7 F
31CT
47CT
45.34105 P
D11Mit369genetic marker45.34105 P
99TG
49.2 F
Z49085est49.2 F
49TC
62CA
53.6 P
03.MMHAP28FRA9.seqrandom53.6 P
112CT
34.MHAa63g10.seqrandom53.6 P
41GA
102CT
55.75 F
45.MMHAP33FRG12.seqrandom53.6 F to 57.9 F
35GA
63.4 F
Results_ER_9_1_95_3_41.seqrandom63.4 P to 63.4 F
24AC
Chr12
2.75 F
10.MHAa91e10.seqrandom2.2 F to 3.3 F
51GA
85CT
135AG
9.8 F
38.MMHAP88FRE11.seqrandom9.8 P to 9.8 F
100TC
13.65 F
24.MMHAP34FRH9.seqrandom13.1 F to 14.2 F
53TA
16.4 F
13.MMHAP22FRE7.seqrandom16.4 F
52AG
130GA
17.5 F
34.MHAa56g10.seqrandom17.5 F
29GA
47TC
18.6 F
36.MMHAP70FRD12.seqrandom18.6 F
120TC
23.0 F
17.MMHAP9FRF8.seqrandom23.0 F
36CT
67GA
Z11664est23.0 F
102AG
36.1 F
Z46227est36.1 F
140CT
41.5 F
12.MMHAP91FLD3.seqrandom41.5 F
140TG
51.4 P
D12Mit17.1genetic marker51.4 P
106TC
57.35 F
M86750est56.8 F to 57.9 F
34GA
Chr13
2.2 F
22.MHAa10f10.seqrandom2.2 F
19TC
36AG
MHAa87h6.seqrandom2.2 P to 2.2 F
59TA
6.6 F
22.MMHAP67FRH7.seqrandom6.6 F to 6.6 P
101GA
7.7 F
MHAa67f1.seqrandom7.7 F
65GA
146GA
9.8 F
13.MMHAP28FRE7.seqrandom9.8 F
121AG
24.0 F
30.MMHAP28FLB6.seqrandom24.0 F
38TG
34.MMHAP35FRD10.seqrandom24.0 F
70GA
40.MMHAP84FRF10.seqrandom24.0 F
77AG
97TA
25.1 F
31.MMHAP76FRC10.seqrandom25.1 F
154AC
47.MHAa95d11.seqrandom25.1 F
33GA
31.7 P
D13Mit104.2genetic marker31.7 P
63AG
37.2 F
11.MMHAP69FLD2.seqrandom37.2 F
31TC
37.75 F
06.MMHAP34FLB3.seqrandom37.2 F to 38.3 F
61GT
Chr14
19.7 F
46.MHAa90d10.seqrandom19.7 F to 19.7 P
34AG
51.95 F
41.MMHAP31FLF5.seqrandom51.4 F to 52.5 F
69GA
126AT
134TC
52.5 F
06.MMHAP59FLB3.seqrandom52.5 F
128AG
MHAa70g10.seqrandom52.5 F
117AG
69.9 F
MHAa67g1.seqrandom69.9 F
101GA
Chr15
5.5 F
42.MMHAP59FLF6.seqrandom5.5 F
36AG
6.6 F
02.MMHAP86FRA8.seqrandom6.6 F
59AG
146CT
13.65 F
02.MMHAP94FLA2.seqrandom13.1 F to 14.2 F
131CT
15.3 F
U28726est14.2 F to 16.4 F
80AG
U50631est14.2 F to 16.4 F
111AG
15.85 F
45.MMHAP33FLG6.seqrandom15.3 P to 16.4 F
86TC
16.4 F
44.MHAa63d8.seqrandom16.4 F
30AG
D15Mit139.2genetic marker16.4 F
153TC
17.5 F
02.MMHAP64FRA8.seqrandom17.5 P to 17.5 F
37GA
77GA
121TC
27.3 P
D15Mit270.1genetic marker27.3 P
89AT
32.8 F
M21734est32.8 F
63TG
MHAa54d6.seqrandom32.8 F
40GC
69CA
35.0 F
M64849est35.0 F
99TC
123GC
44.25 P
10.MMHAP30FLD1.seqrandom42.6 P to 45.9 P
79TC
56.8 F
10.MMHAP5FLD1.seqrandom56.8 F
143AG
59 F
M95545est57.9 F to 60.1 F
48CT
61.2 P
D15Mit97.2genetic marker61.2 P
50TC
Chr16
7.7 F
R75266est7.7 F
49AG
112AT
9.8 F
44.MMHAP75FRG11.seqrandom9.8 F
149TG
27.3 F
U19380est27.3 F
138TA
29.5 F
D16Mit138.1genetic marker29.5 F
29AG
45.9 F
MHAa21c11.seqrandom45.9 F
143TA
48.65 F
34.MMHAP94FRD10.seqrandom45.9 F to 51.4 P
57TC
73AG
51.4 P
MHAa29a8.seqrandom51.4 P
62TC
74TA
Chr17
6.88799 P
MHAa34f3.seqrandom6.88799 P
22TA
10.35 F
19.MMHAP33FRG7.seqrandom9.8 F to 10.9 F
86GA
35.MMHAP28FRD11.seqrandom9.8 F to 10.9 F
78CG
M55637est9.8 F to 10.9 F
58AG
97CT
14.2 F
D18369est14.2 F
121AT
50.3 P
D17Mit123.2genetic marker50.3 P
26TG
Chr18
9.8 P
21.MMHAP54FLG3.seqrandom9.8 P
24AG
15.3 F
12_5_2_2.seqrandom15.3 F
49CT
134GC
9_15_65lon.seqrandom15.3 F
96AG
19.7 F
MHAa30e3.seqrandom19.7 F to 19.7 P
63AG
19.7 P
24.MMHAP33FRH9.seqrandom19.7 P
48GC
37.2 P
01.MMHAP63FRA7.seqrandom37.2 P
57TC
D18Mit216.1genetic marker37.2 P
23TC
Chr19
13.1 F
D19Mit110genetic marker13.1 F
28TG
D19Mit16.1genetic marker13.1 F
35GT
MHAa78g8.seqrandom13.1 F
42AG
17.5 F
08.MMHAP17FRC8.seqrandom17.5 F
104TC
34.45 F
20.MMHAP32FLG2.seqrandom35.0 F to 33.9 P
76CT
26.MMHAP54FLA5.seqrandom35.0 F to 33.9 P
126CT
35.0 F
MHAa67a4.seqrandom35.0 F
37TC
94AG
44.8 P
30.MMHAP84FLB6.seqrandom44.8 P
87CT
57.9 F
X84651est57.9 F
148GA
ChrX
21.9 F
34.MMHAP28FLD4.seqrandom21.9 F
151CT
24.0 P
28.MMHAP28FRB10.seqrandom24.0 P
23CT
56.4206 P
32.MMHAP94FLC5.seqrandom56.4206 P
85CT

For further information contact:

Kerstin Lindblad-Toh