Arachne Main Page

From ArachneWiki

Arachne is the Whole Genome Shotgun Assembler developed at the Broad Institute.

The ArachneWiki is Arachne's online home. To participate in this wiki, please send mail to arachne-dev@broad.mit.edu to ask for an account.

Quick Links

Downloads

• Nightly Build: The current state of Arachne - updated within the last 24 hours.
• Stable Build: The latest stable, trustworthy version of Arachne.
• Sample Projects: Ready-made examples of Arachne input.

Public tools

• Bug tracking system: Bugzilla
• Mailing list: arachne@broad.mit.edu

Reference

• Setup: how to download, install, and compile Arachne.
• Input
• Running Arachne: a tutorial.
• Output
• Looking at Assemblies
• Improving Assemblies

Miscellaneous

• About ArachneWiki
• Arachne's lore

External links

• DNA sequencing
• Shotgun sequencing
• Broad Institute