Arachne Main Page

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* [[w:Shotgun sequencing|Shotgun sequencing]]
* [[w:Shotgun sequencing|Shotgun sequencing]]
* [http://www.broad.mit.edu/ Broad Institute]
* [http://www.broad.mit.edu/ Broad Institute]
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== Publications ==
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Batzoglou S, Jaffe DB, Stanley K, Butler J, Gnerre S, Mauceli E, Berger B, Mesirov JP, Lander ES. January, 2002. ''[http://www.ncbi.nlm.nih.gov/pubmed/11779843 ARACHNE: a whole-genome shotgun assembler. Genome Research]'' 12: 177 - 189.
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Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. ''[http://www.ncbi.nlm.nih.gov/pubmed/12529310 Whole-genome sequence assembly for mammalian genomes: Arachne] 2. Genome Research'' 13: 91 - 96.

Revision as of 20:12, 7 April 2010

Welcome to the ArachneWiki! This is the online home of Arachne, the Whole Genome Shotgun Assembler developed at the Broad Institute.

Quick Links

Arachne Reference

Downloads

  • Nightly Build: The current state of Arachne - updated within the last 24 hours.
  • Stable Build: The latest stable, trustworthy version of Arachne.
  • Sample Projects: Ready-made examples of Arachne input.

Public tools

Miscellaneous

External links

Publications

Batzoglou S, Jaffe DB, Stanley K, Butler J, Gnerre S, Mauceli E, Berger B, Mesirov JP, Lander ES. January, 2002. ARACHNE: a whole-genome shotgun assembler. Genome Research 12: 177 - 189.

Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. Whole-genome sequence assembly for mammalian genomes: Arachne 2. Genome Research 13: 91 - 96.

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