Arachne Main Page

From ArachneWiki

Revision as of 19:30, 7 January 2008 (edit) JoshuaBurton (Talk | contribs) ← Previous diff		Revision as of 18:24, 14 January 2008 (edit) (undo) JoshuaBurton (Talk | contribs) Next diff →
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	* [[Running Arachne]]: a tutorial.		* [[Running Arachne]]: a tutorial.
	* [[Output]]		* [[Output]]
-	* [[Analysis]]: how to examine your assembly.	+	* [[Looking at Assemblies]]
	* [[Improving Assemblies]]		* [[Improving Assemblies]]

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Revision as of 18:24, 14 January 2008

Arachne is the Whole Genome Shotgun Assembler developed at the Broad Institute.

The ArachneWiki is Arachne's online home. To participate in this wiki, please send mail to arachne-dev@broad.mit.edu to ask for an account.

Quick Links

Downloads

• Nightly Build: The current state of Arachne - updated within the last 24 hours.
• Stable Build: The latest stable, trustworthy version of Arachne.
• Sample Projects: Ready-made examples of Arachne input.

Public tools

• Bug tracking system: Bugzilla
• Mailing list: arachne@broad.mit.edu

Reference

• Setup: how to download, install, and compile Arachne.
• Input
• Running Arachne: a tutorial.
• Output
• Looking at Assemblies
• Improving Assemblies

Miscellaneous

• About ArachneWiki
• Arachne's lore

External links

• DNA sequencing
• Shotgun sequencing
• Broad Institute