Arachne Main Page
From ArachneWiki
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[[Arachne]] is the [[w:Shotgun sequencing|Whole Genome Shotgun]] Assembler developed at the [[w:Broad Institute|Broad Institute]]. | [[Arachne]] is the [[w:Shotgun sequencing|Whole Genome Shotgun]] Assembler developed at the [[w:Broad Institute|Broad Institute]]. | ||
Revision as of 21:22, 27 December 2007
Arachne is the Whole Genome Shotgun Assembler developed at the Broad Institute.
The ArachneWiki is Arachne's online home. To participate in this wiki, please send mail to arachne-dev@broad.mit.edu to ask for an account.
Quick Links
Downloads
- Nightly Build: The current state of Arachne - updated within the last 24 hours.
- Stable Build: The latest stable, trustworthy version of Arachne.
- Sample Projects: ready-made examples of Arachne input.
Public tools
- Bugzilla: Bug tracking system
- arachne@broad.mit.edu: Mailing list
Reference
- Setup: how to download, install, and compile Arachne.
- Input
- Running Arachne: from traces to the draft genome.
- Output
- Analysis: how to examine your assembly.
- Algorithms: For improving assemblies.
Miscellaneous
- About ArachneWiki
- Arachne's lore
