http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&action=history&feed=atom 2013-05-24T22:58:47Z Revision history for this page on the wiki MediaWiki 1.11.0 http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3975&oldid=prev 2012-11-02T15:55:47Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 15:55, 2 November 2012</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 22:</td> <td colspan="2" class="diff-lineno">Line 22:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz Sample Projects]: Ready-made examples of Arachne input.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz Sample Projects]: Ready-made examples of Arachne input.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"></td><td colspan="2">&nbsp;</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>=== Public tools ===</div></td><td colspan="2">&nbsp;</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"></td><td colspan="2">&nbsp;</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* Online help: [mailto:crdhelp@broadinsititute.org crdhelp@broadinstitute.org]</div></td><td colspan="2">&nbsp;</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Miscellaneous ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Miscellaneous ===</div></td></tr> </table>

IainM http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3971&oldid=prev 2011-06-21T19:18:15Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 19:18, 21 June 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 21:</td> <td colspan="2" class="diff-lineno">Line 21:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz Sample Projects <del style="color: red; font-weight: bold; text-decoration: none;">(tarball)</del>]: Ready-made examples of Arachne input.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz Sample Projects]: Ready-made examples of Arachne input.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3970&oldid=prev 2011-06-21T19:17:49Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 19:17, 21 June 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 21:</td> <td colspan="2" class="diff-lineno">Line 21:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz]: Ready-made examples of Arachne input.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects.tar.gz <ins style="color: red; font-weight: bold; text-decoration: none;">Sample Projects (tarball)</ins>]: Ready-made examples of Arachne input.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3969&oldid=prev 2011-06-21T19:17:21Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 19:17, 21 June 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 21:</td> <td colspan="2" class="diff-lineno">Line 21:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects<del style="color: red; font-weight: bold; text-decoration: none;">/ Sample Projects</del>]: Ready-made examples of Arachne input.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects<ins style="color: red; font-weight: bold; text-decoration: none;">.tar.gz</ins>]: Ready-made examples of Arachne input.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Public tools ===</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3966&oldid=prev 2011-04-25T14:36:22Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 14:36, 25 April 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 43:</td> <td colspan="2" class="diff-lineno">Line 43:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Gnerre S, Lander ES, Lindblad-Toh K, Jaffe DB: August, 2009. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Gnerre S, Lander ES, Lindblad-Toh K, Jaffe DB: August, 2009. </div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>''[http://genomebiology.com/2009/10/8/R88 Assisted assembly: how to improve a de novo genome assembly by using related species]. Genome Biology'' 10 <del style="color: red; font-weight: bold; text-decoration: none;">(2009), </del>R88.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>''[http://genomebiology.com/2009/10/8/R88 Assisted assembly: how to improve a de novo genome assembly by using related species]. Genome Biology'' 10<ins style="color: red; font-weight: bold; text-decoration: none;">: </ins>R88.</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3965&oldid=prev 2011-04-25T14:35:38Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 14:35, 25 April 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 40:</td> <td colspan="2" class="diff-lineno">Line 40:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Batzoglou S, Jaffe DB, Stanley K, Butler J, Gnerre S, Mauceli E, Berger B, Mesirov JP, Lander ES. January, 2002. ''[http://www.ncbi.nlm.nih.gov/pubmed/11779843 ARACHNE: a whole-genome shotgun assembler. Genome Research]'' 12: 177 - 189.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Batzoglou S, Jaffe DB, Stanley K, Butler J, Gnerre S, Mauceli E, Berger B, Mesirov JP, Lander ES. January, 2002. ''[http://www.ncbi.nlm.nih.gov/pubmed/11779843 ARACHNE: a whole-genome shotgun assembler. Genome Research]'' 12: 177 - 189.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. ''[http://www.ncbi.nlm.nih.gov/pubmed/12529310 Whole-genome sequence assembly for mammalian genomes: Arachne<del style="color: red; font-weight: bold; text-decoration: none;">] </del>2. Genome Research'' 13: 91 - 96.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. ''[http://www.ncbi.nlm.nih.gov/pubmed/12529310 Whole-genome sequence assembly for mammalian genomes: Arachne 2<ins style="color: red; font-weight: bold; text-decoration: none;">]</ins>. Genome Research'' 13: 91 - 96.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Gnerre S, Lander ES, Lindblad-Toh K, Jaffe DB: August, 2009. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Gnerre S, Lander ES, Lindblad-Toh K, Jaffe DB: August, 2009. </div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>''[http://genomebiology.com/2009/10/8/R88 Assisted assembly: how to improve a de novo genome assembly by using related species. Genome Biology'' 10 (2009), R88.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>''[http://genomebiology.com/2009/10/8/R88 Assisted assembly: how to improve a de novo genome assembly by using related species<ins style="color: red; font-weight: bold; text-decoration: none;">]</ins>. Genome Biology'' 10 (2009), R88.</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3964&oldid=prev 2011-04-25T14:35:01Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 14:35, 25 April 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 41:</td> <td colspan="2" class="diff-lineno">Line 41:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. ''[http://www.ncbi.nlm.nih.gov/pubmed/12529310 Whole-genome sequence assembly for mammalian genomes: Arachne] 2. Genome Research'' 13: 91 - 96.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. January, 2003. ''[http://www.ncbi.nlm.nih.gov/pubmed/12529310 Whole-genome sequence assembly for mammalian genomes: Arachne] 2. Genome Research'' 13: 91 - 96.</div></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Gnerre S, Lander ES, Lindblad-Toh K, Jaffe DB: August, 2009. </div></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>''[http://genomebiology.com/2009/10/8/R88 Assisted assembly: how to improve a de novo genome assembly by using related species. Genome Biology'' 10 (2009), R88.</div></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3963&oldid=prev 2011-04-25T14:28:09Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 14:28, 25 April 2011</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 21:</td> <td colspan="2" class="diff-lineno">Line 21:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/nightly/arachne/ Nightly Build]: The current state of Arachne - updated within the last 24 hours.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/Arachne_stable/ Stable Build]: The latest stable, trustworthy version of Arachne.</div></td><td colspan="2">&nbsp;</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects/ Sample Projects]: Ready-made examples of Arachne input.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* [ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/sample_projects/ Sample Projects]: Ready-made examples of Arachne input.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Sante http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3854&oldid=prev 2010-04-07T21:39:59Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 21:39, 7 April 2010</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Arachne Main Page|ARACHNE]] is a program for assembling data from whole genome shotgun sequencing experiments. It was designed for long reads from Sanger sequencing technology, and has been used extensively to assemble many genomes, including many that are large and highly repetitive.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Arachne Main Page|ARACHNE]] is a program for assembling data from whole genome shotgun sequencing experiments. It was designed for long reads from Sanger sequencing technology, and has been used extensively to assemble many genomes, including many that are large and highly repetitive.</div></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&lt;br style=&quot;clear: both&quot; /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Quick Links ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Quick Links ==</div></td></tr> </table>

Ghall http://www.broadinstitute.org/crd/wiki/index.php?title=Arachne_Main_Page&diff=3853&oldid=prev 2010-04-07T21:39:41Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 21:39, 7 April 2010</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>__NOTOC__</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>__NOTOC__</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:Spider-<del style="color: red; font-weight: bold; text-decoration: none;">v2</del>.JPG<del style="color: red; font-weight: bold; text-decoration: none;">|frame</del>|right]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:Spider-<ins style="color: red; font-weight: bold; text-decoration: none;">v2_200</ins>.JPG|right]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">This is the online home of </del>[[Arachne<del style="color: red; font-weight: bold; text-decoration: none;">]], the [[Whole Genome Shotgun Assembly</del>|<del style="color: red; font-weight: bold; text-decoration: none;">Whole Genome Shotgun Assembler</del>]] <del style="color: red; font-weight: bold; text-decoration: none;">developed at the [http://www</del>.<del style="color: red; font-weight: bold; text-decoration: none;">broadinstitute.org/ Broad Institute]</del>.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Arachne <ins style="color: red; font-weight: bold; text-decoration: none;">Main Page</ins>|<ins style="color: red; font-weight: bold; text-decoration: none;">ARACHNE</ins>]] <ins style="color: red; font-weight: bold; text-decoration: none;">is a program for assembling data from whole genome shotgun sequencing experiments</ins>. <ins style="color: red; font-weight: bold; text-decoration: none;">It was designed for long reads from Sanger sequencing technology, and has been used extensively to assemble many genomes, including many that are large and highly repetitive</ins>.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Quick Links ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Quick Links ==</div></td></tr> </table>

Ghall