GIANT consortium data files - Revision history

Dbmirel: file description added

2011-07-01T17:21:20Z

file description added

← Older revision		Revision as of 17:21, 1 July 2011
Line 2:		Line 2:


-	We are releasing the summary data from our 2010 meta-analyses of GWA data, in order to enable other researchers to examine particular variants or loci for their evidence of association with anthropometric traits. The files include p-values and direction of effect at over 2 million directly genotyped or imputed single nucleotide polymorphisms (SNPs). To prevent the possibility of identification of individuals from these summary results, we are not releasing allele frequency data from our samples. A manuscript describing the rationale for releasing association data but not frequency data is in preparation.	+	We are releasing the summary data from our 2010 meta-analyses of Genome-wide Association (GWA) data, in order to enable other researchers to examine particular variants or loci for their evidence of association with anthropometric traits. The files include p-values and direction of effect at over 2 million directly genotyped or imputed single nucleotide polymorphisms (SNPs). To prevent the possibility of identification of individuals from these summary results, we are not releasing allele frequency data from our samples. A manuscript describing the rationale for releasing association data but not frequency data is in preparation.
		+
		+
		+	'''Data file description:'''
		+
		+	Each file consists of the following information for each SNP and its association to the specified trait based on meta-analysis in the respective publication. SNPs where N < 50% of the maximum have been excluded.
		+
		+	;MarkerName :The [http://www.ncbi.nlm.nih.gov/SNP/ dbSNP] name of the genetic marker
		+	;Allele1 :The first allele, by definition the trait-increasing allele (hg18 + strand)
		+	;Allele2 :The second allele (hg18 + strand)
		+	;Freq.Allele1.HapMapCEU :The allele frequency of Allele1 in the [http://www.hapmap.org HapMap] CEU population
		+	;p :P value after meta-analysis using regression coefficients (beta and standard error), and after correction for inflation of test statistics using genomic control both at the individual study level and again after meta-analysis
		+	;N :Number of observations

Dbmirel: spell out BMI

2011-07-01T03:01:56Z

spell out BMI

← Older revision		Revision as of 03:01, 1 July 2011
Line 6:		Line 6:

	== BMI ([[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|download GZIP]]) ==		== BMI ([[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]] 79 MB; 2,471,517 lines) = 38c836542807a3830101bcf48bb34472</tt>	+	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]] -- 79 MB; 2,471,517 lines) = 38c836542807a3830101bcf48bb34472</tt>

-	~~<u>~~If you use these ~~BMI~~ data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.	+	If you use these '''Body Mass Index''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.


	== Height ([[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt.gz ‎\|download GZIP]]) ==		== Height ([[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt.gz ‎\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]] 82 MB; 2,469,636 lines) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>	+	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]] -- 82 MB; 2,469,636 lines) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>

-	~~<u>~~If you use these height data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.	+	If you use these '''height''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.


	== WHRadjBMI ([[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt.gz \|download GZIP]]) ==		== WHRadjBMI ([[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt.gz \|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]] 75 MB; 2,483,326 lines) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>	+	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]] -- 75 MB; 2,483,326 lines) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>

-	~~<u>~~If you use these waist-hip ratio adjusted for BMI data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.	+	If you use these '''waist-hip ratio adjusted for BMI''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.

Dbmirel: rearrange gzip and txt links

2011-07-01T02:57:39Z

rearrange gzip and txt links

← Older revision		Revision as of 02:57, 1 July 2011
Line 5:		Line 5:


-	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|~~BMI~~]] ~~(79 MB; 2,471,517 lines~~) ==	+	== BMI ([[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]]) = 38c836542807a3830101bcf48bb34472</tt>	+	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]] 79 MB; 2,471,517 lines) = 38c836542807a3830101bcf48bb34472</tt>

-	If you use these BMI data, please cite:	+	<u>If you use these BMI data, please cite</u>: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.

-	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.

-	== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|~~Height~~]] ~~(82 MB; 2,469,636 lines~~) ==	+	== Height ([[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt.gz ‎\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]]) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>	+	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]] 82 MB; 2,469,636 lines) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>

-	If you use these height data, please cite:	+	<u>If you use these height data, please cite</u>: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.

-	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.

-	== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|~~WHRadjBMI~~]] ~~(75 MB; 2,483,326 lines~~) ==	+	== WHRadjBMI ([[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt.gz \|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]]) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>	+	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]] 75 MB; 2,483,326 lines) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>

-	If you use these waist-hip ratio adjusted for BMI data, please cite:	+	<u>If you use these waist-hip ratio adjusted for BMI data, please cite</u>: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.
-		+
-	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.	+

Dbmirel: added (again) links to unzipped files

2011-06-30T20:05:43Z

added (again) links to unzipped files

← Older revision		Revision as of 20:05, 30 June 2011
Line 5:		Line 5:


-	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==	+	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|BMI]] (79 MB; 2,471,517 lines) ==
-	<tt>MD5 (GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt) = 38c836542807a3830101bcf48bb34472</tt>	+	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]]) = 38c836542807a3830101bcf48bb34472</tt>

	If you use these BMI data, please cite:		If you use these BMI data, please cite:
Line 13:		Line 13:

	== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==		== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==
-	<tt>MD5 (GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>	+	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]]) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>

	If you use these height data, please cite:		If you use these height data, please cite:
Line 20:		Line 20:

	== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==		== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==
-	<tt>MD5 (GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>	+	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]]) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>

	If you use these waist-hip ratio adjusted for BMI data, please cite:		If you use these waist-hip ratio adjusted for BMI data, please cite:

	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.

Dbmirel: moved BMI above HEIGHT

2011-06-30T19:44:31Z

moved BMI above HEIGHT

← Older revision		Revision as of 19:44, 30 June 2011
Line 4:		Line 4:
	We are releasing the summary data from our 2010 meta-analyses of GWA data, in order to enable other researchers to examine particular variants or loci for their evidence of association with anthropometric traits. The files include p-values and direction of effect at over 2 million directly genotyped or imputed single nucleotide polymorphisms (SNPs). To prevent the possibility of identification of individuals from these summary results, we are not releasing allele frequency data from our samples. A manuscript describing the rationale for releasing association data but not frequency data is in preparation.		We are releasing the summary data from our 2010 meta-analyses of GWA data, in order to enable other researchers to examine particular variants or loci for their evidence of association with anthropometric traits. The files include p-values and direction of effect at over 2 million directly genotyped or imputed single nucleotide polymorphisms (SNPs). To prevent the possibility of identification of individuals from these summary results, we are not releasing allele frequency data from our samples. A manuscript describing the rationale for releasing association data but not frequency data is in preparation.

-
-	~~== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==~~
-	~~<tt>MD5 (GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>~~
-
-	~~If you use these height data, please cite:~~
-
-	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.

	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==		== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==
Line 18:		Line 11:

	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.
		+
		+	== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==
		+	<tt>MD5 (GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>
		+
		+	If you use these height data, please cite:
		+
		+	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.

	== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==		== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==

Dbmirel: added MD5

2011-06-30T19:40:36Z

added MD5

← Older revision		Revision as of 19:40, 30 June 2011
Line 6:		Line 6:

	== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==		== [[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt ‎\|Height]] (82 MB; 2,469,636 lines) ==
		+	<tt>MD5 (GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>

	If you use these height data, please cite:		If you use these height data, please cite:
Line 12:		Line 13:

	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==		== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==
		+	<tt>MD5 (GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt) = 38c836542807a3830101bcf48bb34472</tt>

	If you use these BMI data, please cite:		If you use these BMI data, please cite:
Line 18:		Line 20:

	== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==		== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==
		+	<tt>MD5 (GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>

	If you use these waist-hip ratio adjusted for BMI data, please cite:		If you use these waist-hip ratio adjusted for BMI data, please cite:

	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.

Dbmirel: /* GIANT consortium GWAS metadata will be available here for download. */

2011-06-29T17:02:13Z

GIANT consortium GWAS metadata will be available here for download.

← Older revision		Revision as of 17:02, 29 June 2011
Line 1:		Line 1:
-	= [[Main Page\|GIANT consortium]] GWAS metadata ~~will be~~ available here for download. =	+	= [[Main Page\|GIANT consortium]] GWAS metadata is available here for download. =

Dbmirel: Protected "GIANT consortium data files": High traffic page ([edit=sysop] (indefinite) [move=sysop] (indefinite)) [cascading]

2011-06-29T14:09:43Z

Protected "GIANT consortium data files": High traffic page ([edit=sysop] (indefinite) [move=sysop] (indefinite)) [cascading]

← Older revision

Revision as of 14:09, 29 June 2011

Dbmirel: /* WHRadjBMI (75 MB; 2,483,326 lines) */

2011-06-27T12:24:49Z

WHRadjBMI (75 MB; 2,483,326 lines)

← Older revision		Revision as of 12:24, 27 June 2011
Line 17:		Line 17:
	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.

-	== [[~~media~~:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==	+	== [[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt\|WHRadjBMI]] (75 MB; 2,483,326 lines) ==

	If you use these waist-hip ratio adjusted for BMI data, please cite:		If you use these waist-hip ratio adjusted for BMI data, please cite:

	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.

Dbmirel: /* BMI (79 MB; 2,471,517 lines) */

2011-06-27T12:24:36Z

BMI (79 MB; 2,471,517 lines)

← Older revision		Revision as of 12:24, 27 June 2011
Line 11:		Line 11:
	[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.		[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.

-	== [[~~media~~:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==	+	== [[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|BMI]] (79 MB; 2,471,517 lines) ==

	If you use these BMI data, please cite:		If you use these BMI data, please cite:

← Older revision		Revision as of 03:01, 1 July 2011
Line 6:		Line 6:

	== BMI ([[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|download GZIP]]) ==		== BMI ([[Media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt.gz\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]] 79 MB; 2,471,517 lines) = 38c836542807a3830101bcf48bb34472</tt>	+	<tt>MD5 ([[media:GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt\|GIANT_BMI_Speliotes2010_publicrelease_HapMapCeuFreq.txt]] -- 79 MB; 2,471,517 lines) = 38c836542807a3830101bcf48bb34472</tt>

-	~~<u>~~If you use these ~~BMI~~ data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.	+	If you use these '''Body Mass Index''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935630 Speliotes, E.K., Willer, C.J., Berndt, S.I., Monda, K.L., Thorleifsson, G., Jackson, A.U., Allen, H.L., Lindgren, C.M., Luan, J., Magi, R., et al.] (2010). Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet <strong>42</strong>, 937-948.


	== Height ([[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt.gz ‎\|download GZIP]]) ==		== Height ([[Media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt.gz ‎\|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]] 82 MB; 2,469,636 lines) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>	+	<tt>MD5 ([[media:GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt\|GIANT_HEIGHT_LangoAllen2010_publicrelease_HapMapCeuFreq.txt]] -- 82 MB; 2,469,636 lines) = b51b4c4ff1f03bd33c4b2dfd6b10cb82</tt>

-	~~<u>~~If you use these height data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.	+	If you use these '''height''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20881960 Lango Allen, H., Estrada, K., Lettre, G., Berndt, S.I., Weedon, M.N., Rivadeneira, F., Willer, C.J., Jackson, A.U., Vedantam, S., Raychaudhuri, S., et al.] (2010). Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature <strong>467</strong>, 832-838.


	== WHRadjBMI ([[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt.gz \|download GZIP]]) ==		== WHRadjBMI ([[Media:GIANT WHRadjBMI Heid2010 publicrelease HapMapCeuFreq.txt.gz \|download GZIP]]) ==
-	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]] 75 MB; 2,483,326 lines) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>	+	<tt>MD5 ([[media:GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt\|GIANT_WHRadjBMI_Heid2010_publicrelease_HapMapCeuFreq.txt]] -- 75 MB; 2,483,326 lines) = 8f7e2ca61c33a120db9e7bfe51e3c053</tt>

-	~~<u>~~If you use these waist-hip ratio adjusted for BMI data, please cite~~</u>~~: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.	+	If you use these '''waist-hip ratio adjusted for BMI''' data, please cite: [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=20935629 Heid, I.M., Jackson, A.U., Randall, J.C., Winkler, T.W., Qi, L., Steinthorsdottir, V., Thorleifsson, G., Zillikens, M.C., Speliotes, E.K., Magi, R., et al.] (2010). Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet <strong>42</strong>, 949-960.