BLAST Similarity Search

Multi-fungi BLAST query:This query engine allows you to simultaneously search all the fungal genomic sequences, gene predictions, and predicted protein sequences for the organisms hosted at the Broad Institute. In addition, you can specificy a group of organisms—Ascomycetes, Basidiomycetes, Chytridiomycetes, or Zygomycetes. The following is a list of the organisms in each group; those listed in green have been annotated with predicted protein and genes sequences.

Ascomycetes: Aspergillus nidulans, Aspergillus terreus, Botrytis cinerea, Candida lusitaniae, Candida tropicalis, Chaetomium globosum, Coccidioides immitis, Fusarium graminearum, Fusarium oxysporum, Fusarium verticilloides, Histoplasma capsulatum, Magnaporthe grisea, Neurospora crassa, Pyrenophora tritici repentis, Sclerotinia sclerotiorum, Saccharomyces cerevisiae RM11-1a, Schizosaccharomyces japonicus, Uncinocarpus reesii.

Basidiomycetes: Coprinus cinerea, Cryptococcus neoformans Serotype A, Cryptococcus neoformans Serotype B, Puccinia graminus, Ustilago maydis.

Chytridiomycetes: Batrachochytrium dendrobatidis

Zygomycetes: Rhizopus oryzae.

Perform BLAST search against database
Query sequence in FASTA format*:   (maximum 25000 bp)
Enter your e-mail address to obtain your results via e-mail (required)

Search Parameters: E value
Cutoff score (S2)
Alignments format
Output Options:
Number of alignments
Number of descriptions

After submitting a BLAST request, you will receive a job ID and the results will be mailed to you upon completion. You may query your job status once you have your job ID.

*The ">" description line will be used as the title of your search and the subject of the email message mailed to you.

BLAST databases available for

blastn & tblastnblastx & blastp
All fungal genes (DNA)
All fungal genomes (supercontigs)
Ascomycete genes (DNA)
Ascomycete genomes (supercontigs)
Basidiomycete genes (DNA)
Basidiomycete genomes (supercontigs)
Chytridiomycete genes (DNA)
Chytridiomycete genomes (supercontigs)
Zygomycete genes (DNA)
Zygomycete genomes (supercontigs)
All Fungal proteins
Ascomycete proteins
Basidioymycete proteins
Chytridiomycete proteins
Zygoymycete proteins