Difference between revisions of "Release Notes"

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<a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>
 
<a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>
 
<br>
 
<br>
<h3><font color="#3366ff">GSEA Web Site Release Notes</font></h3>
+
 
<table height="78" width="639" cellspacing="1" cellpadding="1" border="0" align="" summary="">
+
<h3><font color="#3366ff">GSEA Software Release Notes</font></h3>
 +
<table width="700" cellspacing="1" cellpadding="1" border="0" align="" height="78" summary="">
 
     <tbody>
 
     <tbody>
 
         <tr>
 
         <tr>
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         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>Oct 2012</td>
+
             <td>Aug 2016</td>
            <td>3.84*</td>
+
            <td>3.0&nbsp;Beta&nbsp;1<br />
            <td>Several updates and new functionality.</td>
+
            </td>
            <td></td>
+
            <td>Initial Beta release towards eventual v3.0 update<br />
 +
            </td>
 +
            <td>&nbsp;[[GSEA_v3.0_beta_1_Release_Notes|wiki]]</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Jan 2016</td>
 +
            <td>2.2.2*</td>
 +
            <td>Upgrades to support MSigDB v5.1</td>
 +
            <td>&nbsp;</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Oct 2015</td>
 +
            <td>2.2.1</td>
 +
            <td>Fixed an issue with access to the FTP site</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>Jan 2011</td>
+
             <td>Mar 2015</td>
             <td>3.5</td>
+
             <td>2.2.0</td>
            <td>Several bug fixes and some new functionality.</td>
+
             <td>Upgrades to support MSigDB v5.0<br />
             <td>[[Web site v3.4 Release Notes|wiki]]<br />
 
 
             </td>
 
             </td>
 +
            <td>&nbsp;</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Jun 2014</td>
 +
            <td>2.1.0</td>
 +
            <td>Added Enrichment Map visualization of GSEA results</td>
 +
            <td>[[GSEA_v2.1.0._Release_Notes|wiki]]</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Jan 2014</td>
 +
            <td>2.0.14</td>
 +
            <td>Upgrades and bug fixes</td>
 +
            <td>[[GSEA_v2.0.14._Release_Notes|wiki]]</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Apr 2013</td>
 +
            <td>2.0.13</td>
 +
            <td>Upgrades and bug fixes</td>
 +
            <td>[[GSEA_v2.0.13._Release_Notes|wiki]]</td>
 
         </tr>
 
         </tr>
    </tbody>
 
</table>
 
 
<h3><font color="#3366ff">GSEA Software Release Notes</font></h3>
 
<table height="78" width="639" cellspacing="1" cellpadding="1" border="0" align="" summary="">
 
    <tbody>
 
 
         <tr>
 
         <tr>
             <td><strong>Date</strong></td>
+
             <td>Apr 2013</td>
             <td><strong>Release</strong></td>
+
             <td>2.0.12</td>
             <td><strong>Description</strong></td>
+
             <td>Upgrades and bug fixes</td>
             <td><strong>Release Notes</strong></td>
+
             <td>[[GSEA_v2.0.12._Release_Notes|wiki]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
 
             <td>Jan 2013</td>
 
             <td>Jan 2013</td>
             <td>2.0.10*</td>
+
             <td>2.0.10</td>
             <td>Upgrades and bug fixes </td>
+
             <td>Fixed recent FTP access issues </td>
             <td>[[GSEA_v2.10._Release_Notes|wiki]]</td>  
+
             <td>[[GSEA_v2.0.10._Release_Notes|wiki]]</td>
      </tr>
+
        </tr>
 
         <tr>
 
         <tr>
 
             <td>Dec 2012</td>
 
             <td>Dec 2012</td>
 
             <td>2.0.9</td>
 
             <td>2.0.9</td>
 
             <td>Upgrades and bug fixes </td>
 
             <td>Upgrades and bug fixes </td>
             <td>[[GSEA_v2.09._Release_Notes|wiki]]</td>  
+
             <td>[[GSEA_v2.09._Release_Notes|wiki]]</td>
      </tr>
+
        </tr>
      <tr>
+
        <tr>
 
             <td>Oct 2012</td>
 
             <td>Oct 2012</td>
 
             <td>2.0.8</td>
 
             <td>2.0.8</td>
 
             <td>Upgrades and bug fixes </td>
 
             <td>Upgrades and bug fixes </td>
             <td>[[GSEA_v2.08._Release_Notes|wiki]]</td>  
+
             <td>[[GSEA_v2.08._Release_Notes|wiki]]</td>
      </tr>
+
        </tr>
 
         <tr>
 
         <tr>
 
             <td>Sept 2010</td>
 
             <td>Sept 2010</td>
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             <td>1.0</td>
 
             <td>1.0</td>
 
             <td>Initial release</td>
 
             <td>Initial release</td>
             <td>Not available</td>
+
             <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
     </tbody>
 
     </tbody>
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             <td><strong>Release Notes</strong></td>
 
             <td><strong>Release Notes</strong></td>
 
         </tr>
 
         </tr>
         <tr valign="top">
+
         <tr valign="top>
 +
            <td>Jan 2016</td>
 +
            <td>&nbsp;5.1*</td>
 +
            <td>C2 (+1); C7 (+2,962)</td>
 +
            <td>  [[MSigDB_v5.1_Release_Notes|wiki]]</td>
 +
        </tr>
 +
        <tr valign="top">
 +
            <td>Mar 2015</td>
 +
            <td>&nbsp;5.0</td>
 +
            <td>H (+50); C2 (+3)<br>
 +
                    [[Mapping_between_v5.0_and_v4.0_gene_sets|Mapping between v5.0 and v4.0 gene sets]]</td>
 +
            <td>[[MSigDB_v5.0_Release_Notes|wiki]]</td>
 +
        </tr>
 +
        <tr valign="top">
 +
            <td>May 2013</td>
 +
            <td>&nbsp;4.0</td>
 +
            <td>C2 (-128); C7 (+1,910)</td>
 +
            <td>[[MSigDB_v4.0_Release_Notes|wiki]]</td>
 +
        </tr>
 +
      <tr valign="top">
 
             <td>Oct 2012</td>
 
             <td>Oct 2012</td>
             <td>&nbsp;3.1*</td>
+
             <td>&nbsp;3.1</td>
 
             <td>C2 (+1,578); C4 (-23); C6 (+189)<br>
 
             <td>C2 (+1,578); C4 (-23); C6 (+189)<br>
 
                     [[Mapping_between_v3.1_and_v3.0_gene_sets|Mapping between v3.0 and v3.1 gene sets]]</td>
 
                     [[Mapping_between_v3.1_and_v3.0_gene_sets|Mapping between v3.0 and v3.1 gene sets]]</td>
 
             <td>[[MSigDB_v3.1_Release_Notes|wiki]]</td>
 
             <td>[[MSigDB_v3.1_Release_Notes|wiki]]</td>
 
         </tr>
 
         </tr>
         <tr>
+
         <tr valign="top">
 
             <td>Sept 2010</td>
 
             <td>Sept 2010</td>
 
             <td>&nbsp;3.0</td>
 
             <td>&nbsp;3.0</td>
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     </tbody>
 
     </tbody>
 
</table>
 
</table>
 +
<h3><font color="#3366ff">Web Site Release Notes</font></h3>
 +
<table height="78" width="639" cellspacing="1" cellpadding="1" border="0" align="" summary="">
 +
    <tbody>
 +
        <tr>
 +
            <td><strong>Date</strong></td>
 +
            <td><strong>Release</strong></td>
 +
            <td><strong>Description</strong></td>
 +
            <td><strong>Release Notes</strong></td>
 +
        </tr>
 +
          <tr>
 +
            <td>Mar 2015</td>
 +
            <td>5.00*</td>
 +
            <td>Upgrades to support v5.0 MSigDB.</td>
 +
            <td></td>
 +
        </tr>
 +
        <tr>
 +
            <td>Jun 2014</td>
 +
            <td>4.05</td>
 +
            <td>Several minor updates</td>
 +
            <td></td>
 +
        </tr>
 +
        <tr>
 +
            <td>Apr 2013</td>
 +
            <td>3.87</td>
 +
            <td>Several bug fixes and new functionality.</td>
 +
            <td>[[Web site v3.87 Release Notes|wiki]]</td>
 +
        </tr>
 +
      <tr>
 +
            <td>Oct 2012</td>
 +
            <td>3.84</td>
 +
            <td>Several updates and new functionality.</td>
 +
            <td></td>
 +
        </tr>
 +
        <tr>
 +
            <td>Jan 2011</td>
 +
            <td>3.5</td>
 +
            <td>Several bug fixes and some new functionality.</td>
 +
            <td>[[Web site v3.4 Release Notes|wiki]]<br />
 +
            </td>
 +
        </tr>
 +
    </tbody>
 +
</table>
 +
 
<br />
 
<br />
 
<hr>
 
<hr>
 
* Current release <br />
 
* Current release <br />

Revision as of 01:52, 15 August 2016

<a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> | <a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> | <a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> | <a href="http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page">Documentation</a> | <a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>

GSEA Software Release Notes

<tbody> </tbody>
Date Release Description Release Notes
Aug 2016 3.0 Beta 1
Initial Beta release towards eventual v3.0 update
 wiki
Jan 2016 2.2.2* Upgrades to support MSigDB v5.1  
Oct 2015 2.2.1 Fixed an issue with access to the FTP site  
Mar 2015 2.2.0 Upgrades to support MSigDB v5.0
 
Jun 2014 2.1.0 Added Enrichment Map visualization of GSEA results wiki
Jan 2014 2.0.14 Upgrades and bug fixes wiki
Apr 2013 2.0.13 Upgrades and bug fixes wiki
Apr 2013 2.0.12 Upgrades and bug fixes wiki
Jan 2013 2.0.10 Fixed recent FTP access issues wiki
Dec 2012 2.0.9 Upgrades and bug fixes wiki
Oct 2012 2.0.8 Upgrades and bug fixes wiki
Sept 2010 2.0.7 Added support for loading other versions of MSigDB into the browser. wiki
Feb 2010 2.0.6 Fixed recent FTP access issues wiki
Dec 2009 2.0.5 Update GSEA to run under Java 1.6 wiki
Mar 2009 2.0.4 Increased the processing speed of the GSEA algorithm
wiki
Feb 2009 2.0.2 Added support for password-protected ftp site wiki
Feb 2007 2.0.1 Fixed error running leading edge analysis wiki
Jan 2007 2.0 Major release with significant enhancements html
Mar 2005 1.0 Initial release  

MSigDB Release Notes

<tbody> </tbody>
Date Release Description Release Notes
Jan 2016  5.1* C2 (+1); C7 (+2,962) wiki
Mar 2015  5.0 H (+50); C2 (+3)
Mapping between v5.0 and v4.0 gene sets
wiki
May 2013  4.0 C2 (-128); C7 (+1,910) wiki
Oct 2012  3.1 C2 (+1,578); C4 (-23); C6 (+189)
Mapping between v3.0 and v3.1 gene sets
wiki
Sept 2010  3.0 C1 (-60); C2 (+1,380); C3 (-1); C4 (-2)
Mapping between v2.5 and v3.0 gene sets
wiki
April 2008  2.5 C2 (+205); C4 (+456); C5 (+1454)
wiki
Feb 2007  2.1 Minor updates to MSigDB v2.0 annotations
Jan 2007  2.0 C1 (updated); C2 (+269); C3 (+214)
Mapping between v1 and v2 gene sets
wiki
Nov 2005  1.1 C1 (updated); C2 (+350); C3 (+566); C4
pdf
March 2005  1.0 Initial release
pdf

Web Site Release Notes

<tbody> </tbody>
Date Release Description Release Notes
Mar 2015 5.00* Upgrades to support v5.0 MSigDB.
Jun 2014 4.05 Several minor updates
Apr 2013 3.87 Several bug fixes and new functionality. wiki
Oct 2012 3.84 Several updates and new functionality.
Jan 2011 3.5 Several bug fixes and some new functionality. wiki



  • Current release