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Supplementary Table 9: PTPRD somatic mutations
| Genomic position (bp) | Reference genotype | Normal genotype | Tumor genotype | Validation | Copy number | Amino acid change* | SIFT | Domain |
| 8623394 | AA | AA | AG | | 1.72 | D92G | Deleterious | InterPro domain: IPR013106; Pfam domain: Ig_V-set |
| 8514867 | CC | CC | AC | Yes | 2.05 | T229K | Tolerated | |
| 8508382 | AA | AA | AG | Yes | 1.86 | T338A | Tolerated | InterPro domain: IPR003961; Pfam domain: FN_III |
| 8508187 | GG | GG | GT | Yes | 1.56 | G403W | Deleterious | InterPro domain: IPR003961; Pfam domain: FN_III |
| 8507943 | TT | TT | AT | Yes | 1.59 | V484E | Tolerated | InterPro domain: IPR003961; Smart domain: FN_III |
| 8494333 | CC | CC | AC | Yes | 1.69 | R585S | Tolerated | |
| 8475273 | TT | TT | AT | Yes | 2.13 | L1037Q | Deleterious | |
| 8450516 | CC | CC | CG | Yes | 2.16 | P1258R | Deleterious | |
| 8365990 | GG | GG | GT | Yes | 2.11 | R1537L | Deleterious | InterPro domain: IPR000242; Smart domain: Tyr_PP |
| 8321690 | CC | CC | CG | Yes | 1.92 | P1810R | Deleterious | InterPro domain: IPR000242; pfscan: Tyr_PP |
* ENST00000356435 is the transcript used for annotating the mutations.
Supplementary Tables
