CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
ABSOLUTE using Oncoscan copy number 0 2 days 15 hours ago
by inodb
n/a
dRanger 0 5 days 16 hours ago
by sih
n/a
MutSig error 1 32 weeks 3 days ago
by nunu_ping
2 weeks 5 days ago
by ojy
D-ToxoG - where do I get reads pair orientation for the input files 0 5 weeks 3 days ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 23 weeks 2 days ago
by mbark0
10 weeks 2 days ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 11 weeks 3 days ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 1 year 34 weeks ago
by yil8
11 weeks 5 days ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 12 weeks 2 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 12 weeks 2 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 12 weeks 2 days ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 6 weeks ago
by 李斌
13 weeks 3 days ago
by jacmarjorie
MutSig creation of coverage table 1 32 weeks 2 days ago
by ksymeonidh
16 weeks 5 days ago
by Jiantao
ABSOLUTE warning 1 51 weeks 3 days ago
by arshia
20 weeks 4 days ago
by thrushcyc
ABSOLUTE data set 2 1 year 13 weeks ago
by thrushcyc
20 weeks 5 days ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 21 weeks 3 days ago
by wenluo
n/a
Creation of coverage file 0 22 weeks 1 day ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 22 weeks 2 days ago
by ramirob
22 weeks 1 day ago
by ramirob
MutSig 1.5 0 24 weeks 4 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 28 weeks 2 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 31 weeks 3 days ago
by shanbio
n/a
MutSigCV output 1 34 weeks 2 days ago
by adomingues
32 weeks 1 day ago
by Jiantao
MutSigCV preprocess error 5 38 weeks 6 days ago
by yning
32 weeks 1 day ago
by Jiantao
Coverage definition in MuSigCV 0 37 weeks 4 days ago
by yning
n/a
problems with MAF for MutSigCV 0 38 weeks 2 days ago
by adomingues
n/a
memory error in MutSigCV1.4 1 1 year 19 weeks ago
by jiajiap
38 weeks 3 days ago
by adomingues