CGA Tools Help Forum

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Rescuing tumor in normal variants due to tissue-adjacent contamination 0 2 days 15 hours ago
by tbrunetti
n/a
MutSigCV error "not enough mutations to analyze" 4 2 years 37 weeks ago
by slg
1 week 1 day ago
by xiayh
How to Specify Genome Build in MutSigCV Input ? 1 25 weeks 5 days ago
by Hasani
3 weeks 2 days ago
by Shobana
RNA-SeQC GC stratification problem 0 7 weeks 5 days ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 9 weeks 20 hours ago
by fgruber
n/a
How to generate 'categ' field? 1 2 years 19 weeks ago
by subright
9 weeks 2 days ago
by biomrpaul
What is the minimum sample number to run MutSigCV? 0 10 weeks 15 hours ago
by yujun3315
n/a
License information of d-ToxoG 0 10 weeks 2 days ago
by shakuras
n/a
RNASeqc not work with hg38 gtf 0 11 weeks 19 hours ago
by mpolano
n/a
How do I run Indelocator? 0 14 weeks 3 days ago
by vdionellis
n/a
MutSigCV mm9 0 16 weeks 6 days ago
by sophiespo
n/a
Picard ReorderSam 0 18 weeks 2 days ago
by lemelior
n/a
rnaseqc strange results 0 19 weeks 5 days ago
by mpolano
n/a
How to use MutSigCV 1 29 weeks 4 days ago
by bioxujintian
25 weeks 5 days ago
by Hasani
MutSig_preprocess error 0 29 weeks 6 days ago
by farmer
n/a
"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 30 weeks 5 days ago
by dreamerwu
n/a
HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 31 weeks 6 days ago
by dumanoir
n/a
D-ToxoG test data and maf-composing utility? 1 33 weeks 1 day ago
by pruzanov
31 weeks 6 days ago
by pruzanov
ABSOLUTE input 0 33 weeks 3 days ago
by vakulmohanty
n/a
MutSig error 0 40 weeks 17 hours ago
by p_charoentong
n/a
Problems getting MutSig running 2 44 weeks 2 days ago
by david.hadley
40 weeks 1 day ago
by david.hadley
ContEst for sequencing data 0 49 weeks 5 days ago
by rebecca
n/a
ChainFinder pipeline 0 50 weeks 1 day ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 1 year 2 days ago
by jchellmuth
n/a
MutSig error 3 1 year 36 weeks ago
by nunu_ping
1 year 3 weeks ago
by cwarden45