CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
MutSig error 3 36 weeks 4 days ago
by nunu_ping
3 weeks 3 days ago
by cwarden45
ABSOLUTE using Oncoscan copy number 0 4 weeks 3 days ago
by inodb
n/a
dRanger 0 4 weeks 6 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 9 weeks 4 days ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 27 weeks 3 days ago
by mbark0
14 weeks 3 days ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 15 weeks 4 days ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 1 year 38 weeks ago
by yil8
15 weeks 6 days ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 16 weeks 3 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 16 weeks 3 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 16 weeks 3 days ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 10 weeks ago
by 李斌
17 weeks 4 days ago
by jacmarjorie
MutSig creation of coverage table 1 36 weeks 2 days ago
by ksymeonidh
20 weeks 6 days ago
by Jiantao
ABSOLUTE warning 1 1 year 3 weeks ago
by arshia
24 weeks 5 days ago
by thrushcyc
ABSOLUTE data set 2 1 year 17 weeks ago
by thrushcyc
24 weeks 6 days ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 25 weeks 4 days ago
by wenluo
n/a
Creation of coverage file 0 26 weeks 2 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 26 weeks 3 days ago
by ramirob
26 weeks 2 days ago
by ramirob
MutSig 1.5 0 28 weeks 5 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 32 weeks 2 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 35 weeks 3 days ago
by shanbio
n/a
MutSigCV output 1 38 weeks 3 days ago
by adomingues
36 weeks 2 days ago
by Jiantao
MutSigCV preprocess error 5 43 weeks 11 hours ago
by yning
36 weeks 2 days ago
by Jiantao
Coverage definition in MuSigCV 0 41 weeks 5 days ago
by yning
n/a
problems with MAF for MutSigCV 0 42 weeks 3 days ago
by adomingues
n/a
memory error in MutSigCV1.4 1 1 year 23 weeks ago
by jiajiap
42 weeks 3 days ago
by adomingues