CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
ContEst for sequencing data 0 2 weeks 5 days ago
by rebecca
n/a
ChainFinder pipeline 0 3 weeks 1 day ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 5 weeks 2 days ago
by jchellmuth
n/a
MutSig error 3 42 weeks 1 hour ago
by nunu_ping
8 weeks 6 days ago
by cwarden45
ABSOLUTE using Oncoscan copy number 0 9 weeks 6 days ago
by inodb
n/a
dRanger 0 10 weeks 2 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 15 weeks 4 hours ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 32 weeks 5 days ago
by mbark0
19 weeks 6 days ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 21 weeks 7 hours ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 1 year 43 weeks ago
by yil8
21 weeks 1 day ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 21 weeks 6 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 21 weeks 6 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 21 weeks 6 days ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 15 weeks ago
by 李斌
22 weeks 6 days ago
by jacmarjorie
MutSig creation of coverage table 1 41 weeks 5 days ago
by ksymeonidh
26 weeks 2 days ago
by Jiantao
ABSOLUTE warning 1 1 year 8 weeks ago
by arshia
30 weeks 1 day ago
by thrushcyc
ABSOLUTE data set 2 1 year 22 weeks ago
by thrushcyc
30 weeks 1 day ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 31 weeks 5 hours ago
by wenluo
n/a
Creation of coverage file 0 31 weeks 5 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 31 weeks 6 days ago
by ramirob
31 weeks 5 days ago
by ramirob
MutSig 1.5 0 34 weeks 1 day ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 37 weeks 5 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 40 weeks 6 days ago
by shanbio
n/a
MutSigCV output 1 43 weeks 6 days ago
by adomingues
41 weeks 4 days ago
by Jiantao
MutSigCV preprocess error 5 48 weeks 3 days ago
by yning
41 weeks 4 days ago
by Jiantao