CGA Tools Help Forum

TopicRepliesCreatedsort iconLast reply
ContEst for sequencing data 0 2 weeks 5 days ago
by rebecca
n/a
ChainFinder pipeline 0 3 weeks 2 days ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 5 weeks 3 days ago
by jchellmuth
n/a
ABSOLUTE using Oncoscan copy number 0 9 weeks 6 days ago
by inodb
n/a
dRanger 0 10 weeks 3 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 15 weeks 1 day ago
by shai_rosenberg
n/a
Undefined function or variable "method" when categ>1? 0 21 weeks 1 day ago
by ramirob
n/a
MutsigCV - custom region coverage 0 21 weeks 6 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 21 weeks 6 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 21 weeks 6 days ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 31 weeks 1 day ago
by wenluo
n/a
Creation of coverage file 0 31 weeks 6 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 32 weeks 5 hours ago
by ramirob
31 weeks 6 days ago
by ramirob
ABSOLUTE not generating plots 1 32 weeks 6 days ago
by mbark0
20 weeks 2 hours ago
by deepthi.rajagopalan
MutSig 1.5 0 34 weeks 2 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 37 weeks 6 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 41 weeks 11 hours ago
by shanbio
n/a
MutSig creation of coverage table 1 41 weeks 6 days ago
by ksymeonidh
26 weeks 2 days ago
by Jiantao
MutSig error 3 42 weeks 22 hours ago
by nunu_ping
9 weeks 2 hours ago
by cwarden45
MutSigCV output 1 44 weeks 7 hours ago
by adomingues
41 weeks 5 days ago
by Jiantao
Coverage definition in MuSigCV 0 47 weeks 1 day ago
by yning
n/a
problems with MAF for MutSigCV 0 48 weeks 3 hours ago
by adomingues
n/a
MutSigCV preprocess error 5 48 weeks 4 days ago
by yning
41 weeks 5 days ago
by Jiantao
mutSig on targetted capture data ? 0 52 weeks 17 hours ago
by anand_m_t
n/a
Problem with dRanger 0 1 year 1 week ago
by mangfu
n/a