CGA Tools Help Forum

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MutSig error 0 1 week 4 days ago
by p_charoentong
n/a
Problems getting MutSig running 2 5 weeks 6 days ago
by david.hadley
1 week 5 days ago
by david.hadley
ContEst for sequencing data 0 11 weeks 2 days ago
by rebecca
n/a
ChainFinder pipeline 0 11 weeks 5 days ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 14 weeks 5 hours ago
by jchellmuth
n/a
ABSOLUTE using Oncoscan copy number 0 18 weeks 3 days ago
by inodb
n/a
dRanger 0 18 weeks 6 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 23 weeks 4 days ago
by shai_rosenberg
n/a
Undefined function or variable "method" when categ>1? 0 29 weeks 4 days ago
by ramirob
n/a
MutsigCV - custom region coverage 0 30 weeks 3 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 30 weeks 3 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 30 weeks 3 days ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 39 weeks 4 days ago
by wenluo
n/a
Creation of coverage file 0 40 weeks 2 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 40 weeks 4 days ago
by ramirob
40 weeks 2 days ago
by ramirob
ABSOLUTE not generating plots 1 41 weeks 3 days ago
by mbark0
28 weeks 3 days ago
by deepthi.rajagopalan
MutSig 1.5 0 42 weeks 5 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 46 weeks 3 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 49 weeks 4 days ago
by shanbio
n/a
MutSig creation of coverage table 1 50 weeks 3 days ago
by ksymeonidh
34 weeks 6 days ago
by Jiantao
MutSig error 3 50 weeks 4 days ago
by nunu_ping
17 weeks 3 days ago
by cwarden45
MutSigCV output 1 1 year 3 days ago
by adomingues
50 weeks 2 days ago
by Jiantao
Coverage definition in MuSigCV 0 1 year 3 weeks ago
by yning
n/a
problems with MAF for MutSigCV 0 1 year 4 weeks ago
by adomingues
n/a
MutSigCV preprocess error 5 1 year 4 weeks ago
by yning
50 weeks 2 days ago
by Jiantao