CGA Tools Help Forum

TopicRepliesCreatedsort iconLast reply
D-ToxoG - where do I get reads pair orientation for the input files 0 1 week 5 days ago
by shai_rosenberg
n/a
Undefined function or variable "method" when categ>1? 0 7 weeks 6 days ago
by ramirob
n/a
MutsigCV - custom region coverage 0 8 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 8 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 8 weeks 4 days ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 17 weeks 5 days ago
by wenluo
n/a
Creation of coverage file 0 18 weeks 3 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 18 weeks 5 days ago
by ramirob
18 weeks 4 days ago
by ramirob
ABSOLUTE not generating plots 1 19 weeks 4 days ago
by mbark0
6 weeks 5 days ago
by deepthi.rajagopalan
MutSig 1.5 0 21 weeks 2 hours ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 24 weeks 4 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 27 weeks 5 days ago
by shanbio
n/a
MutSig creation of coverage table 1 28 weeks 4 days ago
by ksymeonidh
13 weeks 18 hours ago
by Jiantao
MutSig error 0 28 weeks 5 days ago
by nunu_ping
n/a
MutSigCV output 1 30 weeks 5 days ago
by adomingues
28 weeks 3 days ago
by Jiantao
Coverage definition in MuSigCV 0 33 weeks 6 days ago
by yning
n/a
problems with MAF for MutSigCV 0 34 weeks 5 days ago
by adomingues
n/a
MutSigCV preprocess error 5 35 weeks 2 days ago
by yning
28 weeks 3 days ago
by Jiantao
mutSig on targetted capture data ? 0 38 weeks 5 days ago
by anand_m_t
n/a
Problem with dRanger 0 39 weeks 6 days ago
by mangfu
n/a
dRanger download. 2 42 weeks 13 hours ago
by fjrossello
40 weeks 8 hours ago
by fjrossello
ABSOLUTE warning 1 47 weeks 5 days ago
by arshia
16 weeks 6 days ago
by thrushcyc
MutSig CV No mutations left error. 0 49 weeks 3 days ago
by archakravarthy
n/a
InVEx failure on power file creation from wiggle 1 51 weeks 4 days ago
by jdrum00
50 weeks 6 days ago
by gsaksena
library error while running mutsigCV 2 1 year 2 days ago
by gmelloni
40 weeks 6 days ago
by gsaksena