CGA Tools Help Forum

TopicRepliesCreatedsort iconLast reply
ABSOLUTE using Oncoscan copy number 0 4 weeks 18 hours ago
by inodb
n/a
dRanger 0 4 weeks 3 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 9 weeks 1 day ago
by shai_rosenberg
n/a
Undefined function or variable "method" when categ>1? 0 15 weeks 1 day ago
by ramirob
n/a
MutsigCV - custom region coverage 0 16 weeks 17 hours ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 16 weeks 17 hours ago
by JamesPlatt
n/a
MutsigCV coverage file 0 16 weeks 18 hours ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 25 weeks 1 day ago
by wenluo
n/a
Creation of coverage file 0 25 weeks 6 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 26 weeks 23 hours ago
by ramirob
25 weeks 6 days ago
by ramirob
ABSOLUTE not generating plots 1 27 weeks 15 hours ago
by mbark0
14 weeks 21 hours ago
by deepthi.rajagopalan
MutSig 1.5 0 28 weeks 2 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 32 weeks 4 hours ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 35 weeks 1 day ago
by shanbio
n/a
MutSig creation of coverage table 1 36 weeks 3 hours ago
by ksymeonidh
20 weeks 3 days ago
by Jiantao
MutSig error 3 36 weeks 1 day ago
by nunu_ping
3 weeks 21 hours ago
by cwarden45
MutSigCV output 1 38 weeks 1 day ago
by adomingues
35 weeks 6 days ago
by Jiantao
Coverage definition in MuSigCV 0 41 weeks 2 days ago
by yning
n/a
problems with MAF for MutSigCV 0 42 weeks 22 hours ago
by adomingues
n/a
MutSigCV preprocess error 5 42 weeks 4 days ago
by yning
35 weeks 6 days ago
by Jiantao
mutSig on targetted capture data ? 0 46 weeks 1 day ago
by anand_m_t
n/a
Problem with dRanger 0 47 weeks 2 days ago
by mangfu
n/a
dRanger download. 2 49 weeks 3 days ago
by fjrossello
47 weeks 3 days ago
by fjrossello
ABSOLUTE warning 1 1 year 3 weeks ago
by arshia
24 weeks 2 days ago
by thrushcyc
MutSig CV No mutations left error. 0 1 year 4 weeks ago
by archakravarthy
n/a