CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
POLYSOLVER Installation 0 2 weeks 9 hours ago
by ericg
n/a
Rescuing tumor in normal variants due to tissue-adjacent contamination 0 5 weeks 6 hours ago
by tbrunetti
n/a
RNA-SeQC GC stratification problem 0 12 weeks 3 days ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 13 weeks 5 days ago
by fgruber
n/a
What is the minimum sample number to run MutSigCV? 0 14 weeks 5 days ago
by yujun3315
n/a
License information of d-ToxoG 0 15 weeks 1 hour ago
by shakuras
n/a
RNASeqc not work with hg38 gtf 0 15 weeks 5 days ago
by mpolano
n/a
How do I run Indelocator? 0 19 weeks 16 hours ago
by vdionellis
n/a
MutSigCV mm9 0 21 weeks 4 days ago
by sophiespo
n/a
Picard ReorderSam 0 23 weeks 9 hours ago
by lemelior
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rnaseqc strange results 0 24 weeks 2 days ago
by mpolano
n/a
MutSig_preprocess error 0 34 weeks 3 days ago
by farmer
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"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 35 weeks 2 days ago
by dreamerwu
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HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 36 weeks 3 days ago
by dumanoir
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ABSOLUTE input 0 38 weeks 1 day ago
by vakulmohanty
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ContEst for sequencing data 0 1 year 2 weeks ago
by rebecca
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ChainFinder pipeline 0 1 year 2 weeks ago
by andreasottoriva
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Running D-ToxoG without a Matlab license 0 1 year 4 weeks ago
by jchellmuth
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ABSOLUTE using Oncoscan copy number 0 1 year 9 weeks ago
by inodb
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dRanger 0 1 year 9 weeks ago
by sih
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D-ToxoG - where do I get reads pair orientation for the input files 0 1 year 14 weeks ago
by shai_rosenberg
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Undefined function or variable "method" when categ>1? 0 1 year 20 weeks ago
by ramirob
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MutsigCV - custom region coverage 0 1 year 21 weeks ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 1 year 21 weeks ago
by JamesPlatt
n/a
MutsigCV coverage file 0 1 year 21 weeks ago
by JamesPlatt
n/a