CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
mutSig on targetted capture data ? 0 2 weeks 6 days ago
by anand_m_t
n/a
Problem with dRanger 0 4 weeks 6 hours ago
by mangfu
n/a
ABSOLUTE warning 0 11 weeks 6 days ago
by arshia
n/a
MutSig CV No mutations left error. 0 13 weeks 4 days ago
by archakravarthy
n/a
Mutations droped out after running ABSOLUTE 0 17 weeks 1 day ago
by jzhang20
n/a
MutSigFN and MutSigCL 0 19 weeks 4 hours ago
by 李斌
n/a
Mutsig Error 0 25 weeks 5 days ago
by vyellapa@asu.edu
n/a
ABSOLUTE data set 0 25 weeks 6 days ago
by thrushcyc
n/a
How to generate 'categ' field? 0 27 weeks 6 days ago
by subright
n/a
MutSigCV error mutation_type_dictionary_file.txt.test.txt is not writeable? 0 31 weeks 1 day ago
by biotechnepal
n/a
memory error in MutSigCV1.4 0 32 weeks 1 day ago
by jiajiap
n/a
Mutect - no variants found after chromosome 5 0 32 weeks 1 day ago
by salpie
n/a
MutSigCV for non-cancerous samples 0 33 weeks 6 days ago
by asgarhussainigib
n/a
How to make plots from MutSig 0 37 weeks 1 day ago
by Carla
n/a
SomaticIndelDetector 0 38 weeks 1 day ago
by erichpeterson
n/a
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 40 weeks 11 hours ago
by davidwb7
n/a
TCGA protein change annotation 0 41 weeks 4 days ago
by mstewart
n/a
Where can I download Indelocator 0 44 weeks 22 hours ago
by vang42
n/a
MutSig preprocessing step: categ and effect 0 44 weeks 5 days ago
by hoondy
n/a
RNA-SeQC - rRNA BWA error 0 46 weeks 4 days ago
by igor
n/a
maf -> oncotator format 0 47 weeks 1 day ago
by mrooney
n/a
Questions on MutSig use 0 47 weeks 6 days ago
by fendou000
n/a
ABSOLUTE - maf format 0 49 weeks 21 hours ago
by jg
n/a
generating MutSig coverage file and omitting non-coding variants 0 49 weeks 1 day ago
by apatch
n/a
MutSig Preprocess error 0 52 weeks 16 hours ago
by slg
n/a