CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
MutSigCV mm9 0 1 week 2 days ago
by sophiespo
n/a
Picard ReorderSam 0 2 weeks 5 days ago
by lemelior
n/a
rnaseqc strange results 0 4 weeks 15 hours ago
by mpolano
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How to Specify Genome Build in MutSigCV Input ? 0 10 weeks 1 day ago
by Hasani
n/a
MutSig_preprocess error 0 14 weeks 1 day ago
by farmer
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"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 15 weeks 20 hours ago
by dreamerwu
n/a
HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 16 weeks 1 day ago
by dumanoir
n/a
ABSOLUTE input 0 17 weeks 6 days ago
by vakulmohanty
n/a
MutSig error 0 24 weeks 3 days ago
by p_charoentong
n/a
ContEst for sequencing data 0 34 weeks 1 day ago
by rebecca
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ChainFinder pipeline 0 34 weeks 4 days ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 36 weeks 5 days ago
by jchellmuth
n/a
ABSOLUTE using Oncoscan copy number 0 41 weeks 2 days ago
by inodb
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dRanger 0 41 weeks 5 days ago
by sih
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D-ToxoG - where do I get reads pair orientation for the input files 0 46 weeks 3 days ago
by shai_rosenberg
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Undefined function or variable "method" when categ>1? 0 1 year 2 days ago
by ramirob
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MutsigCV - custom region coverage 0 1 year 1 week ago
by JamesPlatt
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MutsigCV coverage formatting requirements 0 1 year 1 week ago
by JamesPlatt
n/a
MutsigCV coverage file 0 1 year 1 week ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 1 year 10 weeks ago
by wenluo
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Creation of coverage file 0 1 year 11 weeks ago
by ramirob
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MutSig 1.5 0 1 year 13 weeks ago
by Anastaziel
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are 'reptime' and 'hic' columns necessary in covariates table? 0 1 year 17 weeks ago
by suyouhanhan
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BreakPointer:rearrangement_predictions file 0 1 year 20 weeks ago
by shanbio
n/a
Coverage definition in MuSigCV 0 1 year 26 weeks ago
by yning
n/a