CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
RNA-SeQC GC stratification problem 0 4 weeks 4 days ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 5 weeks 6 days ago
by fgruber
n/a
What is the minimum sample number to run MutSigCV? 0 6 weeks 6 days ago
by yujun3315
n/a
License information of d-ToxoG 0 7 weeks 1 day ago
by shakuras
n/a
RNASeqc not work with hg38 gtf 0 7 weeks 6 days ago
by mpolano
n/a
How do I run Indelocator? 0 11 weeks 1 day ago
by vdionellis
n/a
MutSigCV mm9 0 13 weeks 5 days ago
by sophiespo
n/a
Picard ReorderSam 0 15 weeks 1 day ago
by lemelior
n/a
rnaseqc strange results 0 16 weeks 3 days ago
by mpolano
n/a
MutSig_preprocess error 0 26 weeks 5 days ago
by farmer
n/a
"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 27 weeks 4 days ago
by dreamerwu
n/a
HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 28 weeks 5 days ago
by dumanoir
n/a
ABSOLUTE input 0 30 weeks 2 days ago
by vakulmohanty
n/a
MutSig error 0 36 weeks 6 days ago
by p_charoentong
n/a
ContEst for sequencing data 0 46 weeks 4 days ago
by rebecca
n/a
ChainFinder pipeline 0 47 weeks 18 hours ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 49 weeks 2 days ago
by jchellmuth
n/a
ABSOLUTE using Oncoscan copy number 0 1 year 1 week ago
by inodb
n/a
dRanger 0 1 year 2 weeks ago
by sih
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D-ToxoG - where do I get reads pair orientation for the input files 0 1 year 6 weeks ago
by shai_rosenberg
n/a
Undefined function or variable "method" when categ>1? 0 1 year 12 weeks ago
by ramirob
n/a
MutsigCV - custom region coverage 0 1 year 13 weeks ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 1 year 13 weeks ago
by JamesPlatt
n/a
MutsigCV coverage file 0 1 year 13 weeks ago
by JamesPlatt
n/a
Can mutect run on multiple tumor samples? 0 1 year 22 weeks ago
by wenluo
n/a