CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
are 'reptime' and 'hic' columns necessary in covariates table? 0 2 weeks 6 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 6 weeks 5 hours ago
by shanbio
n/a
MutSig error 0 7 weeks 16 hours ago
by nunu_ping
n/a
Coverage definition in MuSigCV 0 12 weeks 1 day ago
by yning
n/a
problems with MAF for MutSigCV 0 12 weeks 6 days ago
by adomingues
n/a
mutSig on targetted capture data ? 0 17 weeks 11 hours ago
by anand_m_t
n/a
Problem with dRanger 0 18 weeks 1 day ago
by mangfu
n/a
ABSOLUTE warning 0 26 weeks 20 hours ago
by arshia
n/a
MutSig CV No mutations left error. 0 27 weeks 5 days ago
by archakravarthy
n/a
Mutations droped out after running ABSOLUTE 0 31 weeks 2 days ago
by jzhang20
n/a
MutSigFN and MutSigCL 0 33 weeks 1 day ago
by 李斌
n/a
ABSOLUTE data set 0 40 weeks 11 hours ago
by thrushcyc
n/a
How to generate 'categ' field? 0 42 weeks 8 hours ago
by subright
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MutSigCV error mutation_type_dictionary_file.txt.test.txt is not writeable? 0 45 weeks 2 days ago
by biotechnepal
n/a
Mutect - no variants found after chromosome 5 0 46 weeks 2 days ago
by salpie
n/a
MutSigCV for non-cancerous samples 0 48 weeks 6 hours ago
by asgarhussainigib
n/a
How to make plots from MutSig 0 51 weeks 2 days ago
by Carla
n/a
SomaticIndelDetector 0 1 year 1 day ago
by erichpeterson
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MutSigCV-compatible coverage file from MuTect Wiggle file output 0 1 year 2 weeks ago
by davidwb7
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TCGA protein change annotation 0 1 year 3 weeks ago
by mstewart
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Where can I download Indelocator 0 1 year 6 weeks ago
by vang42
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MutSig preprocessing step: categ and effect 0 1 year 6 weeks ago
by hoondy
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RNA-SeQC - rRNA BWA error 0 1 year 8 weeks ago
by igor
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maf -> oncotator format 0 1 year 9 weeks ago
by mrooney
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Questions on MutSig use 0 1 year 9 weeks ago
by fendou000
n/a