CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
Computing categ values for MutSigCV input mutation tables 0 1 week 3 days ago
by mshpak
n/a
D-ToxoG error 0 3 weeks 6 days ago
by weilai.dong
n/a
POLYSOLVER Installation 0 6 weeks 5 days ago
by ericg
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Rescuing tumor in normal variants due to tissue-adjacent contamination 0 9 weeks 5 days ago
by tbrunetti
n/a
RNA-SeQC GC stratification problem 0 17 weeks 1 day ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 18 weeks 3 days ago
by fgruber
n/a
What is the minimum sample number to run MutSigCV? 0 19 weeks 3 days ago
by yujun3315
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License information of d-ToxoG 0 19 weeks 4 days ago
by shakuras
n/a
RNASeqc not work with hg38 gtf 0 20 weeks 3 days ago
by mpolano
n/a
How do I run Indelocator? 0 23 weeks 5 days ago
by vdionellis
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MutSigCV mm9 0 26 weeks 2 days ago
by sophiespo
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Picard ReorderSam 0 27 weeks 5 days ago
by lemelior
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rnaseqc strange results 0 29 weeks 15 hours ago
by mpolano
n/a
MutSig_preprocess error 0 39 weeks 1 day ago
by farmer
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"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 40 weeks 20 hours ago
by dreamerwu
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HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 41 weeks 1 day ago
by dumanoir
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ABSOLUTE input 0 42 weeks 6 days ago
by vakulmohanty
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ContEst for sequencing data 0 1 year 7 weeks ago
by rebecca
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ChainFinder pipeline 0 1 year 7 weeks ago
by andreasottoriva
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Running D-ToxoG without a Matlab license 0 1 year 9 weeks ago
by jchellmuth
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ABSOLUTE using Oncoscan copy number 0 1 year 14 weeks ago
by inodb
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dRanger 0 1 year 14 weeks ago
by sih
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D-ToxoG - where do I get reads pair orientation for the input files 0 1 year 19 weeks ago
by shai_rosenberg
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Undefined function or variable "method" when categ>1? 0 1 year 25 weeks ago
by ramirob
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MutsigCV - custom region coverage 0 1 year 26 weeks ago
by JamesPlatt
n/a