CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
Welcome 0 1 year 16 weeks ago
by gsaksena2
n/a
Hi, Nice to meet you. 0 1 year 12 weeks ago
by hyunmin
n/a
questions on duplication rate by RNA-SEQC 1 1 year 7 weeks ago
by chunxuan
1 year 7 weeks ago
by ddeluca
Allele frequency from maf files 1 49 weeks 20 hours ago
by dave.wettmann
48 weeks 1 day ago
by gsaksena
Running MutSig without a matlab licence 3 45 weeks 2 days ago
by cem45
42 weeks 1 day ago
by gsaksena
Error in RNA-seQC 0 41 weeks 5 days ago
by mdeloger
n/a
MCR installation error on linux 0 40 weeks 4 days ago
by Imbeaud
n/a
Status of Mutsig 2 40 weeks 6 days ago
by ddarcy
40 weeks 4 days ago
by gsaksena
Generate new maf file 4 42 weeks 4 days ago
by xunanfang
39 weeks 5 days ago
by xunanfang
MutSig Preprocess error 0 38 weeks 4 days ago
by slg
n/a
MutSig output features 1 39 weeks 4 days ago
by Imbeaud
38 weeks 1 day ago
by gsaksena
RNA-SeqQC support 1 38 weeks 3 days ago
by lletourn
37 weeks 4 days ago
by csb
MutSigCV Error List / Coverage file generation process 2 39 weeks 3 days ago
by davidwb7
36 weeks 4 days ago
by ersgupta
What columns are necessary in MAF for MutSigCV? 2 39 weeks 4 days ago
by MZimm
35 weeks 5 days ago
by fcaramia
generating MutSig coverage file and omitting non-coding variants 0 35 weeks 5 days ago
by apatch
n/a
ABSOLUTE - maf format 0 35 weeks 4 days ago
by jg
n/a
Questions on MutSig use 0 34 weeks 3 days ago
by fendou000
n/a
maf -> oncotator format 0 33 weeks 5 days ago
by mrooney
n/a
Error in RNAseqc 1 33 weeks 5 days ago
by saad khan
33 weeks 1 day ago
by ersgupta
RNA-SeQC - rRNA BWA error 0 33 weeks 1 day ago
by igor
n/a
MutSig preprocessing step: categ and effect 0 31 weeks 2 days ago
by hoondy
n/a
Where can I download Indelocator 0 30 weeks 4 days ago
by vang42
n/a
MutSigCV error "not enough mutations to analyze" 2 32 weeks 1 day ago
by slg
30 weeks 4 days ago
by slg
TCGA protein change annotation 0 28 weeks 1 day ago
by mstewart
n/a
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 26 weeks 4 days ago
by davidwb7
n/a