CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
Welcome 0 1 year 51 weeks ago
by gsaksena2
n/a
Hi, Nice to meet you. 0 1 year 47 weeks ago
by hyunmin
n/a
questions on duplication rate by RNA-SEQC 1 1 year 42 weeks ago
by chunxuan
1 year 42 weeks ago
by ddeluca
Allele frequency from maf files 1 1 year 31 weeks ago
by dave.wettmann
1 year 31 weeks ago
by gsaksena
Running MutSig without a matlab licence 3 1 year 28 weeks ago
by cem45
1 year 25 weeks ago
by gsaksena
Error in RNA-seQC 0 1 year 24 weeks ago
by mdeloger
n/a
MCR installation error on linux 0 1 year 23 weeks ago
by Imbeaud
n/a
Status of Mutsig 2 1 year 23 weeks ago
by ddarcy
1 year 23 weeks ago
by gsaksena
Generate new maf file 4 1 year 25 weeks ago
by xunanfang
1 year 22 weeks ago
by xunanfang
MutSig Preprocess error 0 1 year 21 weeks ago
by slg
n/a
MutSig output features 1 1 year 22 weeks ago
by Imbeaud
1 year 21 weeks ago
by gsaksena
RNA-SeqQC support 1 1 year 21 weeks ago
by lletourn
1 year 20 weeks ago
by csb
MutSigCV Error List / Coverage file generation process 2 1 year 22 weeks ago
by davidwb7
1 year 19 weeks ago
by ersgupta
What columns are necessary in MAF for MutSigCV? 2 1 year 22 weeks ago
by MZimm
1 year 18 weeks ago
by fcaramia
generating MutSig coverage file and omitting non-coding variants 0 1 year 18 weeks ago
by apatch
n/a
ABSOLUTE - maf format 0 1 year 18 weeks ago
by jg
n/a
Questions on MutSig use 0 1 year 17 weeks ago
by fendou000
n/a
maf -> oncotator format 0 1 year 16 weeks ago
by mrooney
n/a
Error in RNAseqc 1 1 year 16 weeks ago
by saad khan
1 year 16 weeks ago
by ersgupta
RNA-SeQC - rRNA BWA error 0 1 year 16 weeks ago
by igor
n/a
MutSig preprocessing step: categ and effect 0 1 year 14 weeks ago
by hoondy
n/a
Where can I download Indelocator 0 1 year 13 weeks ago
by vang42
n/a
MutSigCV error "not enough mutations to analyze" 2 1 year 15 weeks ago
by slg
1 year 13 weeks ago
by slg
TCGA protein change annotation 0 1 year 11 weeks ago
by mstewart
n/a
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 1 year 9 weeks ago
by davidwb7
n/a