CGA Tools Help Forum

TopicRepliesCreatedsort iconLast reply
Welcome 0 3 years 22 weeks ago
by gsaksena2
n/a
Hi, Nice to meet you. 0 3 years 18 weeks ago
by hyunmin
n/a
questions on duplication rate by RNA-SEQC 1 3 years 13 weeks ago
by chunxuan
3 years 12 weeks ago
by ddeluca
Allele frequency from maf files 1 3 years 2 weeks ago
by dave.wettmann
3 years 1 week ago
by gsaksena
SomaticIndelDetector 2 3 years 1 week ago
by alexpenson
2 years 19 weeks ago
by vedellpt
Running MutSig without a matlab licence 3 2 years 51 weeks ago
by cem45
2 years 47 weeks ago
by gsaksena
Errors on running ChainFinder 3 2 years 48 weeks ago
by apatch
2 years 31 weeks ago
by Annees
Generate new maf file 4 2 years 48 weeks ago
by xunanfang
2 years 45 weeks ago
by xunanfang
Error in RNA-seQC 0 2 years 47 weeks ago
by mdeloger
n/a
Status of Mutsig 2 2 years 46 weeks ago
by ddarcy
2 years 46 weeks ago
by gsaksena
MCR installation error on linux 0 2 years 46 weeks ago
by Imbeaud
n/a
MutSig output features 1 2 years 45 weeks ago
by Imbeaud
2 years 43 weeks ago
by gsaksena
What columns are necessary in MAF for MutSigCV? 2 2 years 45 weeks ago
by MZimm
2 years 41 weeks ago
by fcaramia
MutSigCV Error List / Coverage file generation process 2 2 years 45 weeks ago
by davidwb7
2 years 42 weeks ago
by ersgupta
silent and nonsilent rates are too different 3 2 years 44 weeks ago
by tgong
2 years 7 weeks ago
by gsaksena
MutSig Preprocess error 0 2 years 44 weeks ago
by slg
n/a
RNA-SeqQC support 1 2 years 44 weeks ago
by lletourn
2 years 43 weeks ago
by csb
MutSig- genes that lack coverage information 1 2 years 42 weeks ago
by Omer Zuqert
2 years 23 weeks ago
by biotechnepal
MutSig Invalid field error 4 2 years 41 weeks ago
by fcaramia
2 years 21 weeks ago
by msjustu40
generating MutSig coverage file and omitting non-coding variants 0 2 years 41 weeks ago
by apatch
n/a
ABSOLUTE - maf format 0 2 years 41 weeks ago
by jg
n/a
Questions on MutSig use 0 2 years 40 weeks ago
by fendou000
n/a
maf -> oncotator format 0 2 years 39 weeks ago
by mrooney
n/a
Error in RNAseqc 1 2 years 39 weeks ago
by saad khan
2 years 38 weeks ago
by ersgupta
using ABSOLUTE for sequencing data 2 2 years 39 weeks ago
by yil8
1 year 16 weeks ago
by feis@ohsu.edu