CGA Tools Help Forum

TopicRepliesCreatedsort iconLast reply
Welcome 0 1 year 16 weeks ago
by gsaksena2
n/a
Hi, Nice to meet you. 0 1 year 11 weeks ago
by hyunmin
n/a
questions on duplication rate by RNA-SEQC 1 1 year 6 weeks ago
by chunxuan
1 year 6 weeks ago
by ddeluca
Allele frequency from maf files 1 48 weeks 3 days ago
by dave.wettmann
47 weeks 4 days ago
by gsaksena
SomaticIndelDetector 2 47 weeks 14 hours ago
by alexpenson
12 weeks 5 days ago
by vedellpt
Running MutSig without a matlab licence 3 44 weeks 5 days ago
by cem45
41 weeks 4 days ago
by gsaksena
Errors on running ChainFinder 3 42 weeks 2 days ago
by apatch
25 weeks 2 days ago
by Annees
Generate new maf file 4 42 weeks 14 hours ago
by xunanfang
39 weeks 1 day ago
by xunanfang
Error in RNA-seQC 0 41 weeks 1 day ago
by mdeloger
n/a
Status of Mutsig 2 40 weeks 2 days ago
by ddarcy
40 weeks 12 hours ago
by gsaksena
MCR installation error on linux 0 40 weeks 23 hours ago
by Imbeaud
n/a
MutSig output features 1 39 weeks 21 hours ago
by Imbeaud
37 weeks 4 days ago
by gsaksena
What columns are necessary in MAF for MutSigCV? 2 39 weeks 16 hours ago
by MZimm
35 weeks 1 day ago
by fcaramia
MutSigCV Error List / Coverage file generation process 2 38 weeks 6 days ago
by davidwb7
36 weeks 1 hour ago
by ersgupta
silent and nonsilent rates are too different 3 38 weeks 17 hours ago
by tgong
1 week 14 hours ago
by gsaksena
MutSig Preprocess error 0 38 weeks 15 hours ago
by slg
n/a
RNA-SeqQC support 1 37 weeks 6 days ago
by lletourn
37 weeks 21 hours ago
by csb
MutSig- genes that lack coverage information 1 36 weeks 1 day ago
by Omer Zuqert
17 weeks 1 day ago
by biotechnepal
MutSig Invalid field error 4 35 weeks 2 days ago
by fcaramia
15 weeks 1 day ago
by msjustu40
generating MutSig coverage file and omitting non-coding variants 0 35 weeks 1 day ago
by apatch
n/a
ABSOLUTE - maf format 0 35 weeks 20 hours ago
by jg
n/a
Questions on MutSig use 0 33 weeks 6 days ago
by fendou000
n/a
maf -> oncotator format 0 33 weeks 1 day ago
by mrooney
n/a
Error in RNAseqc 1 33 weeks 1 day ago
by saad khan
32 weeks 4 days ago
by ersgupta
using ABSOLUTE for sequencing data 1 32 weeks 6 days ago
by yil8
17 weeks 5 days ago
by lletourn