CGA Tools Help Forum

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MutSig- genes that lack coverage information 1 1 year 6 weeks ago
by Omer Zuqert
39 weeks 3 days ago
by biotechnepal
MutSigCV error mutation_type_dictionary_file.txt.test.txt is not writeable? 0 39 weeks 3 days ago
by biotechnepal
n/a
using ABSOLUTE for sequencing data 1 1 year 3 weeks ago
by yil8
40 weeks 35 min ago
by lletourn
Mutect - no variants found after chromosome 5 0 40 weeks 3 days ago
by salpie
n/a
MutSigCV for non-cancerous samples 0 42 weeks 10 hours ago
by asgarhussainigib
n/a
How to make plots from MutSig 0 45 weeks 2 days ago
by Carla
n/a
mutSigCV input 1 48 weeks 6 days ago
by jxhu
45 weeks 2 days ago
by Carla
SomaticIndelDetector 0 46 weeks 3 days ago
by erichpeterson
n/a
Errors on running ChainFinder 3 1 year 12 weeks ago
by apatch
47 weeks 4 days ago
by Annees
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 48 weeks 1 day ago
by davidwb7
n/a
TCGA protein change annotation 0 49 weeks 5 days ago
by mstewart
n/a
MutSigCV error "not enough mutations to analyze" 2 1 year 1 week ago
by slg
1 year 1 day ago
by slg
Where can I download Indelocator 0 1 year 1 day ago
by vang42
n/a
MutSig preprocessing step: categ and effect 0 1 year 5 days ago
by hoondy
n/a
RNA-SeQC - rRNA BWA error 0 1 year 2 weeks ago
by igor
n/a
Error in RNAseqc 1 1 year 3 weeks ago
by saad khan
1 year 2 weeks ago
by ersgupta
maf -> oncotator format 0 1 year 3 weeks ago
by mrooney
n/a
Questions on MutSig use 0 1 year 3 weeks ago
by fendou000
n/a
ABSOLUTE - maf format 0 1 year 5 weeks ago
by jg
n/a
generating MutSig coverage file and omitting non-coding variants 0 1 year 5 weeks ago
by apatch
n/a
What columns are necessary in MAF for MutSigCV? 2 1 year 9 weeks ago
by MZimm
1 year 5 weeks ago
by fcaramia
MutSigCV Error List / Coverage file generation process 2 1 year 9 weeks ago
by davidwb7
1 year 6 weeks ago
by ersgupta
RNA-SeqQC support 1 1 year 8 weeks ago
by lletourn
1 year 7 weeks ago
by csb
MutSig output features 1 1 year 9 weeks ago
by Imbeaud
1 year 7 weeks ago
by gsaksena
MutSig Preprocess error 0 1 year 8 weeks ago
by slg
n/a