CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
MutSig CV No mutations left error. 0 41 weeks 11 hours ago
by archakravarthy
n/a
InVEx failure on power file creation from wiggle 1 43 weeks 1 day ago
by jdrum00
42 weeks 3 days ago
by gsaksena
silent and nonsilent rates are too different 3 1 year 27 weeks ago
by tgong
42 weeks 3 days ago
by gsaksena
Mutations droped out after running ABSOLUTE 0 44 weeks 4 days ago
by jzhang20
n/a
MAF files in absolute 1 50 weeks 2 days ago
by dklevebring
49 weeks 6 days ago
by dklevebring
SomaticIndelDetector 2 1 year 36 weeks ago
by alexpenson
1 year 2 weeks ago
by vedellpt
How to generate 'categ' field? 0 1 year 3 weeks ago
by subright
n/a
No response about ABSOLUTE access 2 1 year 11 weeks ago
by kanwarjag
1 year 3 weeks ago
by gsaksena2
MutSig Invalid field error 4 1 year 24 weeks ago
by fcaramia
1 year 4 weeks ago
by msjustu40
MutSig- genes that lack coverage information 1 1 year 25 weeks ago
by Omer Zuqert
1 year 6 weeks ago
by biotechnepal
MutSigCV error mutation_type_dictionary_file.txt.test.txt is not writeable? 0 1 year 6 weeks ago
by biotechnepal
n/a
using ABSOLUTE for sequencing data 1 1 year 22 weeks ago
by yil8
1 year 7 weeks ago
by lletourn
Mutect - no variants found after chromosome 5 0 1 year 7 weeks ago
by salpie
n/a
MutSigCV for non-cancerous samples 0 1 year 9 weeks ago
by asgarhussainigib
n/a
How to make plots from MutSig 0 1 year 12 weeks ago
by Carla
n/a
mutSigCV input 1 1 year 15 weeks ago
by jxhu
1 year 12 weeks ago
by Carla
SomaticIndelDetector 0 1 year 13 weeks ago
by erichpeterson
n/a
Errors on running ChainFinder 3 1 year 31 weeks ago
by apatch
1 year 14 weeks ago
by Annees
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 1 year 15 weeks ago
by davidwb7
n/a
TCGA protein change annotation 0 1 year 16 weeks ago
by mstewart
n/a
MutSigCV error "not enough mutations to analyze" 2 1 year 20 weeks ago
by slg
1 year 19 weeks ago
by slg
Where can I download Indelocator 0 1 year 19 weeks ago
by vang42
n/a
MutSig preprocessing step: categ and effect 0 1 year 20 weeks ago
by hoondy
n/a
RNA-SeQC - rRNA BWA error 0 1 year 21 weeks ago
by igor
n/a
Error in RNAseqc 1 1 year 22 weeks ago
by saad khan
1 year 21 weeks ago
by ersgupta