CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
ABSOLUTE using Oncoscan copy number 0 1 year 5 weeks ago
by inodb
n/a
dRanger 0 1 year 5 weeks ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 1 year 10 weeks ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 1 year 28 weeks ago
by mbark0
1 year 15 weeks ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 1 year 16 weeks ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 2 years 39 weeks ago
by yil8
1 year 16 weeks ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 1 year 17 weeks ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 1 year 17 weeks ago
by JamesPlatt
n/a
MutsigCV coverage file 0 1 year 17 weeks ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 2 years 11 weeks ago
by 李斌
1 year 18 weeks ago
by jacmarjorie
MutSig creation of coverage table 1 1 year 37 weeks ago
by ksymeonidh
1 year 21 weeks ago
by Jiantao
ABSOLUTE warning 1 2 years 4 weeks ago
by arshia
1 year 25 weeks ago
by thrushcyc
ABSOLUTE data set 2 2 years 18 weeks ago
by thrushcyc
1 year 25 weeks ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 1 year 26 weeks ago
by wenluo
n/a
Creation of coverage file 0 1 year 27 weeks ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 1 year 27 weeks ago
by ramirob
1 year 27 weeks ago
by ramirob
MutSig 1.5 0 1 year 29 weeks ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 1 year 33 weeks ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 1 year 36 weeks ago
by shanbio
n/a
MutSigCV output 1 1 year 39 weeks ago
by adomingues
1 year 37 weeks ago
by Jiantao
MutSigCV preprocess error 5 1 year 44 weeks ago
by yning
1 year 37 weeks ago
by Jiantao
Coverage definition in MuSigCV 0 1 year 42 weeks ago
by yning
n/a
problems with MAF for MutSigCV 0 1 year 43 weeks ago
by adomingues
n/a
memory error in MutSigCV1.4 1 2 years 24 weeks ago
by jiajiap
1 year 43 weeks ago
by adomingues
Mutsig Error 1 2 years 18 weeks ago
by vyellapa@asu.edu
1 year 43 weeks ago
by yilmazo