CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
Mutect - no variants found after chromosome 5 0 38 weeks 8 hours ago
by salpie
n/a
MutSigCV for non-cancerous samples 0 39 weeks 4 days ago
by asgarhussainigib
n/a
How to make plots from MutSig 0 42 weeks 6 days ago
by Carla
n/a
mutSigCV input 1 46 weeks 3 days ago
by jxhu
42 weeks 6 days ago
by Carla
SomaticIndelDetector 0 44 weeks 8 hours ago
by erichpeterson
n/a
Errors on running ChainFinder 3 1 year 9 weeks ago
by apatch
45 weeks 1 day ago
by Annees
MutSigCV-compatible coverage file from MuTect Wiggle file output 0 45 weeks 5 days ago
by davidwb7
n/a
TCGA protein change annotation 0 47 weeks 3 days ago
by mstewart
n/a
MutSigCV error "not enough mutations to analyze" 2 51 weeks 3 days ago
by slg
49 weeks 6 days ago
by slg
Where can I download Indelocator 0 49 weeks 6 days ago
by vang42
n/a
MutSig preprocessing step: categ and effect 0 50 weeks 3 days ago
by hoondy
n/a
RNA-SeQC - rRNA BWA error 0 1 year 2 days ago
by igor
n/a
Error in RNAseqc 1 1 year 5 days ago
by saad khan
1 year 2 days ago
by ersgupta
maf -> oncotator format 0 1 year 6 days ago
by mrooney
n/a
Questions on MutSig use 0 1 year 1 week ago
by fendou000
n/a
ABSOLUTE - maf format 0 1 year 2 weeks ago
by jg
n/a
generating MutSig coverage file and omitting non-coding variants 0 1 year 2 weeks ago
by apatch
n/a
What columns are necessary in MAF for MutSigCV? 2 1 year 6 weeks ago
by MZimm
1 year 2 weeks ago
by fcaramia
MutSigCV Error List / Coverage file generation process 2 1 year 6 weeks ago
by davidwb7
1 year 3 weeks ago
by ersgupta
RNA-SeqQC support 1 1 year 5 weeks ago
by lletourn
1 year 4 weeks ago
by csb
MutSig output features 1 1 year 6 weeks ago
by Imbeaud
1 year 5 weeks ago
by gsaksena
MutSig Preprocess error 0 1 year 5 weeks ago
by slg
n/a
Generate new maf file 4 1 year 9 weeks ago
by xunanfang
1 year 6 weeks ago
by xunanfang
Status of Mutsig 2 1 year 7 weeks ago
by ddarcy
1 year 7 weeks ago
by gsaksena
MCR installation error on linux 0 1 year 7 weeks ago
by Imbeaud
n/a