CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
D-ToxoG - where do I get reads pair orientation for the input files 0 1 week 5 days ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 19 weeks 4 days ago
by mbark0
6 weeks 4 days ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 7 weeks 5 days ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 1 year 30 weeks ago
by yil8
8 weeks 11 hours ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 8 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 8 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 8 weeks 4 days ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 2 weeks ago
by 李斌
9 weeks 5 days ago
by jacmarjorie
MutSig creation of coverage table 1 28 weeks 4 days ago
by ksymeonidh
13 weeks 13 hours ago
by Jiantao
ABSOLUTE warning 1 47 weeks 5 days ago
by arshia
16 weeks 6 days ago
by thrushcyc
ABSOLUTE data set 2 1 year 9 weeks ago
by thrushcyc
17 weeks 9 hours ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 17 weeks 5 days ago
by wenluo
n/a
Creation of coverage file 0 18 weeks 3 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 18 weeks 4 days ago
by ramirob
18 weeks 3 days ago
by ramirob
MutSig 1.5 0 20 weeks 6 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 24 weeks 4 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 27 weeks 5 days ago
by shanbio
n/a
MutSigCV output 1 30 weeks 4 days ago
by adomingues
28 weeks 3 days ago
by Jiantao
MutSigCV preprocess error 5 35 weeks 1 day ago
by yning
28 weeks 3 days ago
by Jiantao
MutSig error 0 28 weeks 5 days ago
by nunu_ping
n/a
Coverage definition in MuSigCV 0 33 weeks 6 days ago
by yning
n/a
problems with MAF for MutSigCV 0 34 weeks 4 days ago
by adomingues
n/a
memory error in MutSigCV1.4 1 1 year 15 weeks ago
by jiajiap
34 weeks 5 days ago
by adomingues
Mutsig Error 1 1 year 9 weeks ago
by vyellapa@asu.edu
34 weeks 6 days ago
by yilmazo
mutSig on targetted capture data ? 0 38 weeks 5 days ago
by anand_m_t
n/a