CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
ContEst for sequencing data 0 3 weeks 6 hours ago
by rebecca
n/a
ChainFinder pipeline 0 3 weeks 3 days ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 5 weeks 4 days ago
by jchellmuth
n/a
MutSig error 3 42 weeks 2 days ago
by nunu_ping
9 weeks 1 day ago
by cwarden45
ABSOLUTE using Oncoscan copy number 0 10 weeks 1 day ago
by inodb
n/a
dRanger 0 10 weeks 4 days ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 15 weeks 2 days ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 33 weeks 1 day ago
by mbark0
20 weeks 1 day ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 21 weeks 2 days ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 1 year 44 weeks ago
by yil8
21 weeks 4 days ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 22 weeks 1 day ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 22 weeks 1 day ago
by JamesPlatt
n/a
MutsigCV coverage file 0 22 weeks 1 day ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 16 weeks ago
by 李斌
23 weeks 2 days ago
by jacmarjorie
MutSig creation of coverage table 1 42 weeks 16 hours ago
by ksymeonidh
26 weeks 4 days ago
by Jiantao
ABSOLUTE warning 1 1 year 9 weeks ago
by arshia
30 weeks 3 days ago
by thrushcyc
ABSOLUTE data set 2 1 year 23 weeks ago
by thrushcyc
30 weeks 4 days ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 31 weeks 2 days ago
by wenluo
n/a
Creation of coverage file 0 32 weeks 9 hours ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 32 weeks 1 day ago
by ramirob
32 weeks 10 hours ago
by ramirob
MutSig 1.5 0 34 weeks 3 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 38 weeks 16 hours ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 41 weeks 1 day ago
by shanbio
n/a
MutSigCV output 1 44 weeks 1 day ago
by adomingues
42 weeks 2 hours ago
by Jiantao
MutSigCV preprocess error 5 48 weeks 5 days ago
by yning
42 weeks 2 hours ago
by Jiantao