CGA Tools Help Forum

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MutSig error 0 1 week 5 days ago
by p_charoentong
n/a
Problems getting MutSig running 2 6 weeks 4 hours ago
by david.hadley
1 week 6 days ago
by david.hadley
ContEst for sequencing data 0 11 weeks 3 days ago
by rebecca
n/a
ChainFinder pipeline 0 11 weeks 6 days ago
by andreasottoriva
n/a
Running D-ToxoG without a Matlab license 0 14 weeks 16 hours ago
by jchellmuth
n/a
MutSig error 3 50 weeks 5 days ago
by nunu_ping
17 weeks 4 days ago
by cwarden45
ABSOLUTE using Oncoscan copy number 0 18 weeks 4 days ago
by inodb
n/a
dRanger 0 19 weeks 6 hours ago
by sih
n/a
D-ToxoG - where do I get reads pair orientation for the input files 0 23 weeks 5 days ago
by shai_rosenberg
n/a
ABSOLUTE not generating plots 1 41 weeks 4 days ago
by mbark0
28 weeks 4 days ago
by deepthi.rajagopalan
Undefined function or variable "method" when categ>1? 0 29 weeks 5 days ago
by ramirob
n/a
using ABSOLUTE for sequencing data 2 2 years 3 days ago
by yil8
30 weeks 1 hour ago
by feis@ohsu.edu
MutsigCV - custom region coverage 0 30 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage formatting requirements 0 30 weeks 4 days ago
by JamesPlatt
n/a
MutsigCV coverage file 0 30 weeks 4 days ago
by JamesPlatt
n/a
MutSigFN and MutSigCL 1 1 year 24 weeks ago
by 李斌
31 weeks 5 days ago
by jacmarjorie
MutSig creation of coverage table 1 50 weeks 3 days ago
by ksymeonidh
35 weeks 3 hours ago
by Jiantao
ABSOLUTE warning 1 1 year 17 weeks ago
by arshia
38 weeks 6 days ago
by thrushcyc
ABSOLUTE data set 2 1 year 31 weeks ago
by thrushcyc
38 weeks 6 days ago
by thrushcyc
Can mutect run on multiple tumor samples? 0 39 weeks 5 days ago
by wenluo
n/a
Creation of coverage file 0 40 weeks 3 days ago
by ramirob
n/a
categ_flag should be numeric error on example data 1 40 weeks 4 days ago
by ramirob
40 weeks 3 days ago
by ramirob
MutSig 1.5 0 42 weeks 6 days ago
by Anastaziel
n/a
are 'reptime' and 'hic' columns necessary in covariates table? 0 46 weeks 3 days ago
by suyouhanhan
n/a
BreakPointer:rearrangement_predictions file 0 49 weeks 4 days ago
by shanbio
n/a