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  • Five Questions for Soumya Raychaudhuri

    Haley Bridger, September 22nd, 2010 | Filed under

    Recent papers have suggested that duplications and deletions of large segments of DNA from patients with schizophrenia, ADHD, and other psychiatric illnesses are linked to genes involved in brain development. Soumya Raychaudhuri and his colleagues at the Broad Institute wanted to take a deeper look – to do so, they developed a statistical test in which they matched people with schizophrenia (“cases”) to people without the disease (“controls”) and compared these duplications and deletions (known as copy number variation, or CNV).

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  • Five Questions for Brad Bernstein

    Haley Bridger, August 23rd, 2010 | Filed under

    Earlier this month, researchers from the Broad Institute and Massachusetts General Hospital (MGH) published a paper in Nature Methods about a new approach to an established technique. The technique is called ChiP-seq, short for chromatin immunoprecipitation with high-throughput sequencing, and is used to study how protein and DNA interact. The paper's authors are postdoctoral scholars Mazhar Adli and Jiang Zhu and Broad associate member Brad Bernstein. Brad answered five of our questions about his latest paper and his field of interest.

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  • More books for science enthusiasts

    Haley Bridger, August 19th, 2010 | Filed under

    If you’ve already finished all of the books on the previous list, here are a few more science-themed summer reads that we’ve been hearing about.

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  • ‘Nice, friendly yeast’ prompts a new approach

    Haley Bridger, July 27th, 2010 | Filed under

    Yeast is as common in the lab as it is in a bakery. It’s a very useful organism because it grows quickly, is easy to culture, and its genetics have been studied extensively. But its very simplicity means it is also has limits – and those limits prompted Broad core member Aviv Regev and her colleagues to think about developing another model for studying cell circuitry.

    Regev’s work, which she outlined in a recent talk at the Functional Genomics Data Society in Boston, focuses in part on our cells’ ability to respond to changes.

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  • ISMB meeting: Svante Pääbo

    Haley Bridger, July 12th, 2010 | Filed under

    This week, the 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) meets in Boston, and Broad-minded bloggers are covering some of the talks. Jill Mesirov, the Broad Institute's director of computational biology and bioinformatics, is one of the co-chairs of the conference and Broad Institute core member David Altshuler will be one of the conference's keynote speakers.

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  • Word of the day: Genome

    Haley Bridger, July 9th, 2010 | Filed under

    This afternoon, Ira Flatow will be talking with medical educator Howard Markel about the word genome on Science Friday and I can't wait to tune in! The word has a pretty fascinating 80-year history and we use it all the time in the stories we write and blog entries we post. As such, we've added "genome" as a term to our glossary.

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  • Happy birthday, Nettie Maria Stevens

    Haley Bridger, July 7th, 2010 | Filed under

    Today is the birthday of Nettie Maria Stevens (1861-1912), whose discoveries helped researchers understand chromosomal sex determination. In the early part of the 20th century, many biologists believed that as an embryo develops, factors that a baby is exposed to during gestation (such as the mother’s diet) influence whether the baby will be male or female. But Stevens and her colleagues helped demonstrate that the chromosomes we inherit determine sex, and that this happens at the moment of fertilization, not over the course of development.

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  • Science at the beach: Summer reading suggestions

    Haley Bridger, June 29th, 2010 | Filed under

    Flip-flop season is upon us and it’s time for beach reading to commence. If you’re like me, by now you’ve had your fill of mystery novels and thrillers and want to cuddle up with something that has a bit more science to it. With a little help from friends around the Broad, I’ve put together a list of some of the science-themed books (both fiction and nonfiction) I’m hoping to read this summer – maybe you’d like to read them too.

    Here’s what’s on my summer reading bookshelf:

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