Genes Categorized by PFAM Domain

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Family
Family Description
# of Genes
BPD_transp_1 Binding-protein-dependent transport system inner membrane component 495
YgbB YgbB family 12
Exonuc_VII_L Exonuclease VII, large subunit 11
PTS_IIB PTS system, Lactose/Cellobiose specific IIB subunit 32
HTH_11 HTH domain 54
Glycos_transf_1 Glycosyl transferases group 1 64
Mur_ligase_M Mur ligase middle domain 66
Mur_ligase_C Mur ligase family, glutamate ligase domain 66
Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme 26
Lipoprotein_18 NlpB/DapX lipoprotein 11
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22
OstA OstA-like protein 22
MutS_V MutS domain V 11
MutS_II MutS domain II 11
DctM DctM-like transporters 52
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529
SufE Fe-S metabolism associated domain 11
BRCT BRCA1 C Terminus (BRCT) domain 11
YkuD Ykud domain 32
DUF2607 Protein of unknown function (DUF2607) 11
GATase_2 Glutamine amidotransferases class-II 67
Anth_synt_I_N Anthranilate synthase component I, N terminal region 22
cNMP_binding Cyclic nucleotide-binding domain 87
SecD_SecF Protein export membrane protein 33
ECH Enoyl-CoA hydratase/isomerase family 33
V4R V4R domain 11
APH Phosphotransferase enzyme family 36
Cw-hydrolase Cell wall-associated hydrolase 7
NUDIX NUDIX domain 129
PPC Bacterial pre-peptidase C-terminal domain 66
Leukocidin Leukocidin/Hemolysin toxin family 11
Phage_Mu_F Phage Mu protein F like protein 2
Inositol_P Inositol monophosphatase family 22
Fer4 4Fe-4S binding domain 199
FolB Dihydroneopterin aldolase 11
DUF81 Domain of unknown function DUF81 44
PP_kinase Polyphosphate kinase 11
DUF839 Bacterial protein of unknown function (DUF839) 11
TAT_signal TAT (twin-arginine translocation) pathway signal sequence 22
Thioredoxin Thioredoxin 44