Protein Information - TB Genomes
 

Quick Links

  • Feature Search:Search for features by type. Filter on an additional text query if desired.
  • Gene Expression Publications: Search and browse publications with gene expression data that are stored in TBDB.
  • Samples and Conditions:
    Search for a gene over all published samples and explore the expression significance of the indicated gene.
  • Gene Profiles:
    Search for a gene in the published data sets. You will be able to explore the gene expression of the indicated gene in each publication.
  • My Repository (sign in required): Access your saved microarray data sets for further analysis.
  • BLAST - search all genomes by sequencing similarity
  • Genes - Gene annotations by functional categories
  • Download - download data files for sequence and annotation

    • Protein Information

    Protein Structure Viewer

    Enter GeneID or Symbol  

    Epitopes

     
  • Search for epitopes by name, peptide sequence or partial sequence with wildcard
    or epitope type (type:"T Cell", type:"B Cell" or type:"MHC Binding")
    or search by name, symbol or locus of gene with wildcard (e.g. esx* or gene:esxA).
  • Epitopes may be found for a coordinate range using this syntax: coord:[1500000 TO 2000000].
  • Search terms may be combined using logical operators AND, OR and NOT.
  • Please refer to this page for more detailed information about search syntax.

    List All Genes Containing Known Epitopes