News

6/21/2011    Updated release of the nuclear annotation of S. nodorum

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name	Accession	Total Genes	Submission Date
Stagonospora nodorum (Phaeosphaeria nodorum) SN15	AAGI01000000	12,380	6/21/2011

The annotated release presents:

• Protein and nucleotide BLAST databases
• Precomputed results of BlastX and HMMer Analyses
• Alternative proteins predicted by various gene callers
• tRNA predictions
• RFam features

A full summary can be found here. Click here for a description of how the gene predictions were generated.

5/13/2005    Preliminary annotation of S. nodorum

We are pleased to announce the release of our putative gene set for Stagonospora nodorum. This release includes:

• Putative gene set (16597 genes)
• Blast databases are available
• Search feature annotations

4/15/2005    Initial release of >10X sequence assembly

The initial release of our >10X sequence assembly of the Stagonospora nodorum assembly. The sequence traces from the Broad Institute sequencing can be downloaded from the NCBI trace repository.

Important information about this release can be found here.

This initial release allows:

• BLAST searches against our 10X genome assembly
• Downloads of the consensus sequence and additional files for the genome assembly
• Search and download a particular region of the genome assembly

There will be a second upcoming release containing the annotation of predicted genes and other genomic features.