Analysis

Blast    Search our database for local alignments against nucleotide or protein sequence.

Pfam    Browse Genes by PFAM Domain

Rfam    Browse Functional RNAs

Functional Enrichment    Search for genes based on function

Dot Plot    Displays a dotplot of a reference genome compared to one or more alternate genomes.

Circular Genome Viewer    View features on Circular Genome Viewer

Synteny Map    Displays synteny between genomes relative to chromosomes.

Gene/Feature Search    Search for genes and features such as BlastX hits, tRNAs, rRNAs, ORFs, and more.

Search Gene Families    Search gene families by included genomes or by gene description.

View Genome Regions    View entire genomes or portions thereof.