Genome Statistics

Genome Coverage

P. aeruginosa 2192 P. aeruginosa C3719
Genic DNA as % of Total: 88.0 88.8
Gene Density: 1 Gene per 1114.3 bp 1 Gene per 1113.9 bp

Feature Statistics

P. aeruginosa 2192 [ Download tab delimited ]
SUPERCONTIG GENE NONGENIC
count 1 6197 5007
total length (BP) 6905121 6077684 828354
coverage 100.0 88.0 12.0
GC% 66.2% 66.9% 60.5%
min length 6905121 90 1
max length 6905121 15624 9128
median length 6905121 852 89
mean length 6905121 981 165
P. aeruginosa C3719[ Download tab delimited ]
SUPERCONTIG GENE NONCODING
count 1 5586 4619
total length (BP) 6222097 5522943 699295
coverage 100.0 88.8 11.2
GC% 66.5% 67.1% 61.2%
min length 6222097 101 1
max length 6222097 14979 7014
median length 6222097 858 90
mean length 6222097 989 151

Features by Length

P. aeruginosa 2192 [ Download tab delimited ] P. aeruginosa C3719 [ Download tab delimited ]

Codon Usage

P. aeruginosa 2192
[ Download tab delimited ]
[ Download codon usage by gene, tab delimited ]
Codon Amino Acid Count Usage
* * 2034791 100.00%
AAA K 7847 0.39%
AAC N 44420 2.18%
AAG K 49410 2.43%
AAT N 7886 0.39%
ACA T 2816 0.14%
ACC T 64524 3.17%
ACG T 15080 0.74%
ACN 1 0.00%
ACT T 4486 0.22%
AGA R 1737 0.09%
AGC S 51014 2.51%
AGG R 5401 0.27%
AGT S 5713 0.28%
ANN 3 0.00%
ATA I 2176 0.11%
ATC I 74367 3.65%
ATG M 40696 2.00%
ATT I 6436 0.32%
CAA Q 14424 0.71%
CAC H 31019 1.52%
CAG Q 72285 3.55%
CAT H 13847 0.68%
CCA P 6724 0.33%
CCC P 27228 1.34%
CCG P 66110 3.25%
CCN 1 0.00%
CCT P 7304 0.36%
CGA R 8706 0.43%
CGC R 98293 4.83%
CGG R 31216 1.53%
CGT R 16748 0.82%
CNN 3 0.00%
CTA L 3823 0.19%
CTC L 54421 2.67%
CTG L 159910 7.86%
CTN 1 0.00%
CTT L 7795 0.38%
GAA E 46469 2.28%
GAC D 83606 4.11%
GAG E 73614 3.62%
GAT D 22984 1.13%
GCA A 13020 0.64%
GCC A 132959 6.53%
GCG A 78818 3.87%
GCT A 13192 0.65%
GGA G 10288 0.51%
GGC G 121630 5.98%
GGG G 21245 1.04%
GGT G 18455 0.91%
GNN 6 0.00%
GTA V 8386 0.41%
GTC V 56559 2.78%
GTG V 65170 3.20%
GTT V 6936 0.34%
NAC 2 0.00%
NCA 1 0.00%
NCC 1 0.00%
NCG 1 0.00%
NCT 1 0.00%
NGA 1 0.00%
NGC 2 0.00%
NNA 2 0.00%
NNC 4 0.00%
NNG 6 0.00%
NNN 2299 0.11%
NNT 1 0.00%
NTG 1 0.00%
TAA $ 640 0.03%
TAC Y 39429 1.94%
TAG $ 809 0.04%
TAT Y 10645 0.52%
TCA S 2344 0.12%
TCC S 24553 1.21%
TCG S 27608 1.36%
TCT S 2692 0.13%
TGA $ 5384 0.26%
TGC C 19198 0.94%
TGG W 30932 1.52%
TGT C 2520 0.12%
TNN 2 0.00%
TTA L 757 0.04%
TTC F 65708 3.23%
TTG L 17893 0.88%
TTN 1 0.00%
TTT F 4146 0.20%
P. aeruginosa C3719
[ Download tab delimited ]
[ Download codon usage by gene, tab delimited ]
Codon Amino Acid Count Usage
* * 1843378 100.00%
AAA K 6816 0.37%
AAC N 39975 2.17%
AAG K 44417 2.41%
AAN 1 0.00%
AAT N 6696 0.36%
ACA T 2500 0.14%
ACC T 58719 3.19%
ACG T 12821 0.70%
ACT T 3838 0.21%
AGA R 1754 0.10%
AGC S 46766 2.54%
AGG R 5186 0.28%
AGN 2 0.00%
AGT S 4996 0.27%
ANN 2 0.00%
ATA I 1855 0.10%
ATC I 66664 3.62%
ATG M 36128 1.96%
ATT I 5220 0.28%
CAA Q 13107 0.71%
CAC H 28235 1.53%
CAG Q 64585 3.50%
CAN 4 0.00%
CAT H 12648 0.69%
CCA P 6374 0.35%
CCC P 24846 1.35%
CCG P 61176 3.32%
CCN 4 0.00%
CCT P 7223 0.39%
CGA R 8705 0.47%
CGC R 90157 4.89%
CGG R 28800 1.56%
CGN 2 0.00%
CGT R 15312 0.83%
CNN 6 0.00%
CTA L 3631 0.20%
CTC L 49881 2.71%
CTG L 145823 7.91%
CTN 1 0.00%
CTT L 6631 0.36%
GAA E 41880 2.27%
GAC D 75486 4.09%
GAG E 65963 3.58%
GAN 1 0.00%
GAT D 19685 1.07%
GCA A 11071 0.60%
GCC A 121002 6.56%
GCG A 71206 3.86%
GCN 6 0.00%
GCT A 11686 0.63%
GGA G 9375 0.51%
GGC G 110449 5.99%
GGG G 18766 1.02%
GGN 2 0.00%
GGT G 16322 0.89%
GNN 5 0.00%
GTA V 7315 0.40%
GTC V 51205 2.78%
GTG V 58395 3.17%
GTN 1 0.00%
GTT V 5793 0.31%
NAC 2 0.00%
NAT 2 0.00%
NCC 1 0.00%
NCG 3 0.00%
NGA 2 0.00%
NGC 5 0.00%
NGG 2 0.00%
NNA 1 0.00%
NNC 6 0.00%
NNG 4 0.00%
NNN 5600 0.30%
NNT 6 0.00%
NTT 3 0.00%
TAA $ 600 0.03%
TAC Y 35401 1.92%
TAG $ 739 0.04%
TAT Y 9325 0.51%
TCA S 2119 0.11%
TCC S 22306 1.21%
TCG S 25051 1.36%
TCN 1 0.00%
TCT S 2378 0.13%
TGA $ 5125 0.28%
TGC C 18025 0.98%
TGG W 28163 1.53%
TGN 1 0.00%
TGT C 2377 0.13%
TNN 1 0.00%
TTA L 638 0.03%
TTC F 59653 3.24%
TTG L 15523 0.84%
TTT F 3194 0.17%