P. brasiliensis
Gene Search
News
October 29, 2011 Paracoccidioides Genome Paper
Our paper "Comparative Genomic Analysis of Human Fungal Pathogens Causing Paracoccidioidomycosis" is available today in PLoS Genetics
6/17/2010 The updated release of our mitochondrial annotation of Paracoccidioides brasiliensis strains Pb01 and Pb03
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Genes Accession Submission Date P. brasiliensis Pb01 mitochondrion 13 ABKH01000000 6/17/2010 P. brasiliensis Pb03 mitochondrion 17 ABHV01000000 6/17/2010 This annotated release presents:
- Predicted protein gene sets
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- tRNA predictions
- RFam features
A full summary can be found here.
6/17/2010 The updated release of our mitochondrial assemblies of Paracoccidioides brasiliensis strains Pb01 and Pb03
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Coverage Accession Submission Date P. brasiliensis Pb01 mitochondrion N/A ABKH01000000 6/17/2010 P. brasiliensis Pb03 mitochondrion N/A ABHV01000000 6/17/2010 This release allows:
- BLAST searches against our genome assemblies
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly
8/19/2009 Release of the results of Automated Mitochondrial Annotation on three strains of P. brasiliensis
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Genes Accession Submission Date P. brasiliensis Pb01 19 ABKH00000000 8/19/2008 P. brasiliensis Pb03 13 ABHV00000000 8/19/2008 P. brasiliensis Pb18 14 ABKI00000000 8/19/2008 This annotated release presents:
- Predicted protein gene sets
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- tRNA predictions
- RFam features
A full summary can be found here.
6/25/2008 Release of the results of Automated Annotation on three strains of P. brasiliensis
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Genes Accession Submission Date P. brasiliensis Pb01 9,132 ABKH00000000 6/25/2008 P. brasiliensis Pb03 7,875 ABHV00000000 6/25/2008 P. brasiliensis Pb18 8,741 ABKI00000000 6/25/2008 This annotated release presents:
- Predicted protein gene sets
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- Alternative proteins predicted by various gene callers (FGeneSH, GeneID)
- tRNA predictions
- RFam features
A full summary can be found here. Click here for a description of how the gene predictions were generated.
3/10/2008 The initial Release of Paracoccidioides brasiliensis strains Pb01 and Pb18 sequence assemblies
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Coverage Accession Submission Date P. brasiliensis Pb01 7X ABKH00000000 2/26/2008 P. brasiliensis Pb18 8.5X ABKI00000000 2/26/2008 This release allows:
- BLAST searches against our genome assemblies
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly
11/27/2007 The initial Release of Paracoccidioides brasiliensis Strain Pb03 sequence assembly
The assembled sequences for the following strain have been deposited at DDBJ/EMBL/GenBank:
Strain Name Coverage Accession Submission Date P. brasiliensis Pb03 8.91X ABHV01000000 11/26/07 This release allows:
- BLAST searches against our 8.91X (7.65X Q>20) genome assembly
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly