Gene Family Search

Select gene families on the basis of their member genomes. Filter on an additional text query if desired. See examples below.

Basic Search Options:

Text search:

Strict orthologs (one gene per genome):

yes no

Genome Options:

Minimum number of genomes in common:

	Don't care	Include	Exclude
M. tub. 98-R604 INH-RIF-EM
M. tuberculosis C
M. tuberculosis F11
M. tuberculosis Haarlem
M. tuberculosis KZN 1435 (MDR)
M. tuberculosis KZN 4207 (DS)
M. tuberculosis KZN 605 (XDR)
M. tuberculosis W-148
	[all]	[all]	[all]

Example Queries

Click on an example query to configure the search form, then click the "Submit" button to see results.

search for Gene Families containing genes with annotation matching the string "kinase", and including at least 3 genomes.
search for Gene Families containing exactly one gene from [M. tuberculosis F11, M. tuberculosis Haarlem, M. tuberculosis KZN 4207 (DS)] and no genes from [M. tuberculosis KZN 1435 (MDR)].
search for Gene Families containing one or more genes from [M. tuberculosis KZN 1435 (MDR)] and no genes from [M. tuberculosis F11, M. tuberculosis Haarlem, M. tuberculosis KZN 4207 (DS)].