Gene Family Search

Select gene families on the basis of their member genomes. Filter on an additional text query if desired. See examples below.

Basic Search Options:

Text search:

Strict orthologs (one gene per genome):

yes no

Genome Options:

Minimum number of genomes in common:

	Don't care	Include	Exclude
L. monocytogenes 10403S
L. monocytogenes F6900
L. monocytogenes FSL J1-194
L. monocytogenes FSL J2-071
L. monocytogenes FSL N1-017
L. monocytogenes FSL N3-165
L. monocytogenes FSL R2-503
L. monocytogenes HPB2262
L. monocytogenes J0161
L. monocytogenes J2818
	[all]	[all]	[all]

Example Queries

Click on an example query to configure the search form, then click the "Submit" button to see results.

search for Gene Families containing genes with annotation matching the string "kinase", and including at least 3 genomes.
search for Gene Families containing exactly one gene from [L. monocytogenes HPB2262, L. monocytogenes F6900, L. monocytogenes FSL J1-194] and no genes from [L. monocytogenes J2818].
search for Gene Families containing one or more genes from [L. monocytogenes J2818] and no genes from [L. monocytogenes HPB2262, L. monocytogenes F6900, L. monocytogenes FSL J1-194].