Filarial worms
Gene Search
News
2/23/2011 Release of our updated Loa Loa annotation
Strain Name Total Genes Accession Submission Date Loa loa 14,925 ADBU02000000 2/23/2011 The annotated release presents:
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- Alternative proteins predicted by various gene callers
- tRNA predictions
- RFam features
A full summary can be found here.
10/8/2010 Release of our updated Loa Loa assembly with scaffolds and the annotations transferred from previous assembly
The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:
Strain Name Coverage Accession Total Genes Submission Date Loa loa 20X ADBU02000000 16,318 10/8/2010 The assembly release allows:
- BLAST searches against our genome assemblies
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly.
A full summary can be found here.
The annotated release presents:
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- Alternative proteins predicted by various gene callers
- tRNA predictions
- RFam features
A full summary can be found here.
6/23/2010 Wolbachia of Brugia malayi
To aid in comparative analysis, we have added the fully-sequenced Wolbachia endosymbiont of Brugia malayi, as well as its annotation.
Sequencing of this bacteria was done at New England Biolabs and Integrated Genomics, Inc.
5/7/2010 Release of our annotation of 2 Filarial worm assemblies
Strain Name Total Genes Accession Submission Date Loa loa 16,333 ADBU01000000 5/7/2010 Wuchereria bancrofti 19,327 ADBV01000000 5/7/2010 The annotated release presents:
- Protein and nucleotide BLAST databases
- Precomputed results of BlastX and HMMer Analyses
- Alternative proteins predicted by various gene callers
- tRNA predictions
- RFam features
A full summary can be found here.
2/2/2010 Release of assemblies of 2 strains of Wolbachia
Strain Name Coverage Accession Submission Date Wolbachia endosymbiont of Wuchereria bancrofti 40.88X ADHD00000000 2/2/2010 Wolbachia endosymbiont of Onchocerca volvulus 5.88X ADHE00000000 2/2/2010 This release allows:
- BLAST searches against our genome assemblies
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly.
12/21/2009 Release of the assemblies of 3 Filarial worms
Strain Name Coverage Accession Submission Date Loa loa 20X ADBU01000000 12/21/2009 Wuchereria bancrofti 12X ADBV01000000 12/21/2009 Onchocerca volvulus 5X ADBW01000000 12/21/2009 This release allows:
- BLAST searches against our genome assemblies
- Downloads of the consensus sequence and additional files for the genome assembly
- Search and download a particular region of the genome assembly.