News

1/20/2011    Release of genome assembly and annotation of the Colletotrichum higginsianum IMI 349063

The assembled sequence and its annotation have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. higginsianum IMI 349063 24X (454)
60X (Solexa)
0.2X (Sanger) 		CACQ01000000 15,591 1/20/2011

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

9/29/2010    Release of our assembly and annotation of the Colletotrichum graminicola strain M1.001 Mitochondrion

The assembled sequence and its annotation have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. graminicola M1.001 Finished ACOD01000000 16 9/29/2010

A full summary can be found here.

9/29/2010    Release of our annotation of Colletotrichum graminicola strain M1.001

Strain Name Total Genes Accession Submission Date
C. graminicola M1.001 12,016 ACOD01000000 9/29/2010

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

6/17/2009    Initial Release of our assembly of Colletotrichum graminicola strain M1.001

Strain Name Coverage Accession Submission Date
C. graminicola M1.001 9.09X (8.17X Q>20) ACOD01000000 6/17/2009

This release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly, annotated Pfam, Rfam features and ab initio annotation using GeneMark.
  • Search the read alignments of strain M5.001 against the assembly of strain M1.001.