Genes Categorized by PFAM Domain

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Family
Family Description
# of Genes
DUF321 Protein of unknown function (DUF321) 544
DMA DMRTA motif 3
XRN_N XRN 5'-3' exonuclease N-terminus 13
Toxin_14 Alpha-A conotoxin PIVA-like protein 36
EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6
RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2828
WWamide WWamide peptide 868
Histone Core histone H2A/H2B/H3/H4 68
BNR BNR/Asp-box repeat 326
Tiny_TM_bacill Protein of unknown function (Tiny_TM_bacill) 104
PSI_8 Photosystem I reaction centre subunit VIII 47
PY_rept_46 Plasmodium yoelii repeat (PY_rept_46) 146
PQ-loop PQ loop repeat 77
SinI Anti-repressor SinI 7
Shugoshin_C Shugoshin C terminus 23
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 529
Ribosomal_S16 Ribosomal protein S16 6
WD40 WD domain, G-beta repeat 2575
AT_hook AT hook motif 413
CH Calponin homology (CH) domain 70
Glycos_transf_3 Glycosyl transferase family, a/b domain 6
DNA_RNApol_7kD DNA directed RNA polymerase, 7 kDa subunit 9
A2L_zn_ribbon A2L zinc ribbon domain 47
VlpA_repeat Mycoplasma hyorhinis VlpA repeat 525
IQ IQ calmodulin-binding motif 131
PABP Poly-adenylate binding protein, unique domain 6
IRK_N Inward rectifier potassium channel N-terminal 6
Bradykinin Bradykinin 259
Tryp_FSAP Tryptophyllin-3 skin active peptide 599
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 80
Rio2_N Rio2, N-terminal 6
Nod_GRP Nodule-specific GRP repeat 6
Suf Suppressor of forked protein (Suf) 6
Anti-silence Anti-silencing protein, ASF1-like 4
TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 27
Allatostatin Allatostatin 713
Fil_haemagg Haemagluttinin repeat 17
Formyl_trans_N Formyl transferase 11
Sulfakinin Sulfakinin family 662
Secretin_N Bacterial type II/III secretion system short domain 8