Gene Family Search

Select gene families on the basis of their member genomes. Filter on an additional text query if desired. See examples below.

Basic Search Options:

Text search:

Strict orthologs (one gene per genome):

yes no

Genome Options:

Minimum number of genomes in common:

	Don't care	Include	Exclude
C. aldenense WAL-18727
C. bolteae WAL-14578
C. citroniae WAL-17108
C. citroniae WAL-19142
C. clostr. 2_1_49FAA
C. clostr. WAL-7855
C. hathewayi WAL-18680
C. innocuum 6_1_30
C. orbisc. 1_3_50AFAA
C. perfringens WAL-14572
C. symbiosum WAL-14163
C. symbiosum WAL-14673
Clostr. sp. 1_1_41A1FAA
Clostr. sp. 7_3_54FAA
Clostridium sp. 7_2_43FAA (v2)
Clostridium sp. D5
	[all]	[all]	[all]

Example Queries

Click on an example query to configure the search form, then click the "Submit" button to see results.

search for Gene Families containing genes with annotation matching the string "kinase", and including at least 3 genomes.
search for Gene Families containing exactly one gene from [C. aldenense WAL-18727 , C. bolteae WAL-14578, C. citroniae WAL-17108] and no genes from [C. citroniae WAL-19142].
search for Gene Families containing one or more genes from [C. citroniae WAL-19142] and no genes from [C. aldenense WAL-18727 , C. bolteae WAL-14578, C. citroniae WAL-17108].