News

11/1/2011    Release of our assembly and annotation of 3 strains of Clostridium

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. innocuum 6_1_30 18.46x ACTD01000000 4,908 11/1/2011
C. perfringens WAL-14572 19x ADLP01000000 3,183 11/1/2011
C. aldenense WAL-18727 15x ADLH01000000 5,828 11/1/2011

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

11/1/2011    Updated release of our assembly and annotation of 1 strain of Clostridium

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
Clostridium sp. 7_2_43FAA 29x ACDK02000000 3,528 11/1/2011

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

8/1/2011    Release of our assembly and annotation of 5 strains of Clostridium

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. citroniae WAL-17108 27x ADLJ01000000 6,079 8/1/2011
C. orbiscindens 1_3_50AFAA 19x ADLO01000000 4,335 8/1/2011
C. clostridioforme 2_1_49FAA 28x ADLL01000000 5,256 8/1/2011
C. hathewayi WAL-18680 17x ADLN01000000 5,184 8/1/2011
Clostridium sp. 7_3_54FAA 37x ACWK01000000 4,894 8/1/2011

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

3/31/2011    Release of our assembly and annotation of 4 strains of Clostridium

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. bolteae WAL-14578 39x ADLI01000000 6,063 3/31/2011
C. citroniae WAL-19142 28x ADLK01000000 5,704 3/31/2011
C. clostridioforme WAL-7855 34x ADLM01000000 5,224 3/31/2011
Clostridium sp. 1_1_41A1FAA 25x ACTE01000000 2,952 3/31/2011

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

12/22/2010    Release of our assembly and annotation of 2 strains of Clostridium

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Total Genes Submission Date
C. symbiosum WAL-14673 20x ADLR01000000 4,198 12/22/2010
C. symbiosum WAL-14163 2x ADLQ01000000 4,691 12/22/2010

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

03/10/2010    Release of our assembly and annotation of Clostridium sp. D5

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name Coverage Accession Submission Date Total Genes Annotation Submission Date
Clostridium sp. D5 36.62x ADBG01000000 03/10/2010 4,566 03/10/2010

The assembly release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

A full summary can be found here. Click here for a description of how the gene predictions were generated.

2/27/2009    Release of the results of Automated Annotation of 1 strain of Clostridium

Strain Name Total Genes Accession Submission Date
Clostridium sp. 7_2_43FAA 3,455 ACDK01000000 2/27/2009

This annotated release presents:

A full summary can be found here.

2/5/2009    Initial Release of our assembly of 1 strain of Clostridium

Strain Name Coverage Accession Submission Date
Clostridium sp. 7_2_43FAA 29.68X ACDK01000000 2/5/2009

This release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.