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Sequence Downloads

supercontigs.fasta
contigs.fasta
contigs.agp
chromosomal.agp
All File Types
C. albicans WO-1
C. albicans sc5314 v21
C. guilliermondii
C. lusitaniae
C. parapsilosis
C. tropicalis
D. hansenii
L. elongisporus
All Assemblies->

Gene Downloads

genes.fasta
transcripts.fasta
transcripts.gtf
proteins.fasta
proteins_stops.fasta
pfam_to_genes.txt
genes_upstream_1000.fasta
genes_upstream_utr_1000.fasta
genes_downstream_1000.fasta
genes_downstream_utr_1000.fasta
genome_summary.txt
genome_summary_per_gene.txt
All File Types
C. albicans WO-1
C. albicans sc5314 v21
C. guilliermondii
C. lusitaniae
C. parapsilosis
C. tropicalis
D. hansenii
L. elongisporus
All Assemblies->

Single Nucleotide Polymorphism (SNP) Data Sets

C. albicans WO-1 SNPs - WO-1 assembly and reads. 2.8 MB 04/10/2009
C. albicans WO-1/SC5314 SNPs - WO-1 assembly and SC5314 reads. 5.8 MB 04/10/2009
aCAWO1_rSC5314_Broad_SNPs.txt.gz 5.8 MB 04/10/2009

Supplementary Downloads

AGP file containing supercontig & contig details, including contig size, contig position, gap size and linkage information for C. albicans. 7.5 KB 12/10/2008
Gzipped comma-separated file contains paired ends of Fosmid clones, where both ends of each clone are in the C. albicans assembly. 155.3 KB 12/10/2008
AGP file containing supercontig & contig details, including contig size, contig position, gap size and linkage information for C. guilliermondii. 10.0 KB 12/10/2008
Gzipped comma-separated file contains paired ends of Fosmid clones, where both ends of each clone are in the C. guilliermondii assembly. 331.4 KB 12/10/2008
AGP file containing supercontig & contig details, including contig size, contig position, gap size and linkage information for C. lusitaniae assembly 8.2 KB 12/10/2008
Gzipped comma-separated file contains paired ends of Fosmid clones, where both ends of each clone are in the C. lusitaniae assembly. 202.3 KB 12/10/2008
AGP file containing supercontig & contig details, including contig size, contig position, gap size and linkage information for C. tropicalis assembly. 8.8 KB 12/10/2008
Gzipped tab-delimited file contains Fosmid clones where both ends of each clone are in the C. tropicalis assembly. 428.3 KB 12/10/2008
Gzipped comma-separated file contains paired ends of Fosmid clones, where both ends of each clone are in theL. elongisporus assembly. 300.5 KB 12/10/2008
Ribosomal RNA for C. parapsilosis (CABE01000000) 6.0 KB 01/26/2009
Gene families across Candida and Saccharomyces species. 1.0 MB 03/20/2009

Single nucleotide polymorphism (SNP) data sets.

C. albicans WO-1 SNPs - WO-1 assembly and reads. 2.8 MB 04/10/2009
C. albicans WO-1/SC5314 SNPs - WO-1 assembly and SC5314 reads. 5.8 MB 04/10/2009
C.albicans WO-1 - SC5314 Common Heterozygous SNPs. 53.1 KB 04/10/2009
C. albicans SC5314/WO-1 SNPs - SC5314 assembly and WO-1 reads. 5.8 MB 04/10/2009
C. albicans SC5314 SNPs - SC5314 assembly and reads. 3.5 MB 04/10/2009
L. elongisporus SNPs - LE1 assembly and reads. 5.0 MB 04/10/2009
C. tropicalis SNPs - CT3 assembly and reads. 2.8 MB 04/10/2009
C.parpsilosis SNPs - CP2 assembly and reads. 160.7 KB 04/10/2009
C.albicans WO-1 High Confidence SNPs. (SNPs that were found in both ABI as well as Illumina reads.) 1.6 MB 04/08/2009
C. albicans SC5314 SNPs - SC5314 assembly and reads. SNPs for the current version of SC5314 Assembly 21 (Release Date: 25-Nov-2008. tinyurl.com/CaSC5314-CurrentVersion) and SC5314 reads. 3.6 MB 01/07/2010
C. albicans SC5314/WO-1 SNPs - SC5314 assembly and WO-1 reads. SNPs for the current version of SC5314 Assembly 21 (Release Date: 25-Nov-2008. tinyurl.com/CaSC5314-CurrentVersion) and WO-1 reads. 5.7 MB 01/07/2010