Assembly Statistics

Assembly Stats

Coverage Assembly Size Total Contig Length Scaffolds Scaffold N50 Contigs Contig N50 %Q40
B. abortus bv. 6 str. 870 43.36x 3.27 Mb 3.25 Mb 13 776.83 Kb 55 122.68 Kb 99.99
B. abortus bv. 4 str. 292 33.92x 3.27 Mb 3.25 Mb 12 777.84 Kb 47 180.09 Kb 99.98
B. abortus bv. 3 str. Tulya 45.57x 3.28 Mb 3.26 Mb 13 780.31 Kb 60 122.12 Kb 99.99
B. abortus bv. 2 str. 86/8/59 45.21x 3.29 Mb 3.26 Mb 21 1.92 Mb 130 48.79 Kb 99.98
B. abortus bv. 9 str. C68 42.98x 3.27 Mb 3.25 Mb 13 776.93 Kb 50 135.33 Kb 99.99
B. suis bv. 5 str. 513 33.06x 3.32 Mb 3.29 Mb 19 1.92 Mb 113 56.83 Kb 99.98
B. suis bv. 3 str. 686 26.62x 3.3 Mb 3.27 Mb 23 781.6 Kb 129 48.24 Kb 99.95
B. pinnipedialis B2/94 41.80x 3.4 Mb 3.35 Mb 19 1.93 Mb 94 92.1 Kb 99.98
B. pinnipedialis M163/99/10 25.37x 3.41 Mb 3.26 Mb 89 588.53 Kb 418 13.3 Kb 99.82
B. pinnipedialis M292/94/1 38.33x 3.37 Mb 3.32 Mb 15 1.9 Mb 80 90.59 Kb 99.99
B. ceti M644/93/1 40.95x 3.33 Mb 3.28 Mb 17 909.47 Kb 104 67.53 Kb 99.99
B. ceti M13/05/1 35.10x 3.34 Mb 3.28 Mb 22 910.34 Kb 118 47.26 Kb 99.98
B. ceti M490/95/1 41.07x 3.35 Mb 3.27 Mb 17 1.21 Mb 142 38.93 Kb 99.99
B. ceti B1/94 37.41x 3.34 Mb 3.28 Mb 14 1.91 Mb 102 54.49 Kb 99.98
B. melitensis bv. 1 str. Rev.1 33.97x 3.31 Mb 3.27 Mb 26 1.17 Mb 93 93.72 Kb 99.97
B. melitensis bv. 2 str. 63/9 33.16x 3.28 Mb 3.28 Mb 60 118.85 Kb 60 118.85 Kb 99.97
B. melitensis bv. 3 str. Ether 43.72x 3.31 Mb 3.28 Mb 13 1.18 Mb 105 60.88 Kb 99.99
B. neotomae 5K33 38.96x 3.33 Mb 3.3 Mb 11 1.92 Mb 68 93.9 Kb 99.99
Brucella sp. 83/13 30.20x 3.15 Mb 3.11 Mb 20 817.79 Kb 77 101.75 Kb 99.98
B. sp. F5/99 28.59x 3.34 Mb 3.29 Mb 18 783.16 Kb 85 91.92 Kb 99.99
B. abortus NCTC 8038 86.62x 3.28 Mb 3.26 Mb 16 777.95 Kb 45 223.3 Kb 100.00
B. melitensis 16M 80.33x 3.29 Mb 3.27 Mb 15 1.17 Mb 56 116.78 Kb 99.99
B. suis bv. 4 str. 40 53.15x 3.31 Mb 3.29 Mb 12 1.9 Mb 44 183.46 Kb 99.99
B. abortus bv. 5 str. B3196 22.40x 3.34 Mb 3.31 Mb 48 1.93 Mb 130 63.04 Kb 99.78
Brucella sp. NVSL 07-0026 18.96x 3.3 Mb 3.27 Mb 17 1.9 Mb 87 75.98 Kb 99.86
B. abortus 9-941 N/A 3.29 Mb 3.29 Mb 2 2.12 Mb 2 2.12 Mb -
B. suis ATCC 23445 N/A 3.32 Mb 3.32 Mb 2 1.92 Mb 2 1.92 Mb -
B. melitensis 16M -- 3.29 Mb 3.29 Mb 2 2.12 Mb 2 2.12 Mb -
B. suis 1330 -- 3.32 Mb 3.32 Mb 2 2.11 Mb 2 2.11 Mb -
B. abortus bv. 1 NI010 46x 3.3 Mb 3.29 Mb 3 1.93 Mb 14 412.9 Kb -
B. abortus bv. 1 NI016 91x 3.29 Mb 3.28 Mb 3 1.92 Mb 12 416.58 Kb -
B. abortus bv. 1 NI021 177x 3.3 Mb 3.29 Mb 3 1.93 Mb 17 376.81 Kb -
B. abortus bv. 1 NI259 129x 3.28 Mb 3.28 Mb 4 1.16 Mb 13 387.19 Kb -
B. abortus bv. 1 NI435a 130x 3.3 Mb 3.3 Mb 3 1.92 Mb 15 382.96 Kb -
B. abortus bv. 1 NI474 46x 3.3 Mb 3.3 Mb 3 1.93 Mb 15 395.53 Kb -
B. abortus bv. 1 NI486 231x 3.29 Mb 3.28 Mb 4 1.16 Mb 21 259.5 Kb -
B. abortus bv. 1 NI488 130x 3.3 Mb 3.29 Mb 5 779.31 Kb 31 240.45 Kb -

Library Clones

We end-sequenced the following types of libraries:

Plasmid Fosmid

Table Header Definitions

  • Coverage -fold coverage of the genome sequenced
  • Assembly Size length of complete genome sequence, calculated by adding lengths of all scaffolds together
  • Total Contig Length total length of all the contigs added together
  • Scaffolds number of scaffolds/supercontigs contained in a genome assembly
  • Scaffold N50 length of the scaffold containing the middle base of the genome
  • Contigs number of contigs contained in a genome assembly
  • Contig N50 length of the contig containing the middle base of the genome
  • %Q40 percentage of contig bases with quality scores equal to or greater than 40
  • Plasmid number of plasmids sequenced and subsequently assembled in the genome
  • Fosmid number of fosmids sequenced and subsequently assembled in the genome