Assembly Statistics

Assembly Stats

Coverage Assembly Size Total Contig Length Scaffolds Scaffold N50 Contigs Contig N50 %Q40
A. clavatus - 27.86 Mb 27.86 Mb 143 2.49 Mb 143 2.49 Mb -
A. fumigatus - 29.38 Mb 29.38 Mb 8 3.95 Mb 8 3.95 Mb -
A. flavus - 36.79 Mb 36.79 Mb 138 2.39 Mb 138 2.39 Mb -
A. nidulans 10 X 30.07 Mb 30.07 Mb 248 282.27 Kb 248 282.27 Kb -
A. niger - 37.2 Mb 37.2 Mb 143 2.02 Mb 143 2.02 Mb -
A. oryzae - 37.12 Mb 37.12 Mb 28 2.36 Mb 28 2.36 Mb -
A. terreus 11.05 X 29.33 Mb 29.2 Mb 26 1.91 Mb 267 224.15 Kb 99.65
N. fischeri - 32.55 Mb 32.55 Mb 976 2.93 Mb 976 2.93 Mb -
A. nidulans mitochondrion -- 33.23 Kb 33.23 Kb 1 33.23 Kb 1 33.23 Kb -

Library Clones

We end-sequenced the following types of libraries:

Plasmid Fosmid
A. nidulans 3,335,687 75,624
A. terreus 465,932 64,895

Table Header Definitions

  • Coverage -fold coverage of the genome sequenced
  • Assembly Size length of complete genome sequence, calculated by adding lengths of all scaffolds together
  • Total Contig Length total length of all the contigs added together
  • Scaffolds number of scaffolds/supercontigs contained in a genome assembly
  • Scaffold N50 length of the scaffold containing the middle base of the genome
  • Contigs number of contigs contained in a genome assembly
  • Contig N50 length of the contig containing the middle base of the genome
  • %Q40 percentage of contig bases with quality scores equal to or greater than 40
  • Plasmid number of plasmids sequenced and subsequently assembled in the genome
  • Fosmid number of fosmids sequenced and subsequently assembled in the genome