News

6/26/2013    The release of our RNAseq-based annotation for Saprolegnia declina

Strain Name Total Genes Accession Submission Date
S. declina VS20 17,359 AIJL01000000 6/26/2013

This annotated release presents:

A full summary can be found here.

4/17/2012    The release of our Assembly of Saprolegnia declina

Strain Name Coverage Accession Submission Date
S. declina VS20 171x AIJL01000000 4/17/2012

This release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

2/11/2011    The release of RNA-Seq updated gene set for Saprolegnia parasitica

Strain Name Total Genes Accession Submission Date
S. parasitica CBS 223.65 20,113 ADCG02000000 2/11/2011

This annotated release presents:

A full summary can be found here.

2/11/2011    The release of our updated assembly of Saprolegnia parasitica

Strain Name Coverage Accession Submission Date
S. parasitica CBS 223.65
(Mitochondrial sequence included)
25X ADCG02000000 2/11/2011

This release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.

1/11/2011    Release of polymorphism data

We have identified SNPs in the reference genome S. parasitica CBS 223.65 and the highly-salmon-pathogenic isolate of S. parasitica (N12) and made SNP calls available for download.

5/7/2010    The release of our Annotation of Saprolegnia parasitica

Strain Name Total Genes Accession Submission Date
S. parasitica CBS 223.65 18,762 ADCG01000000 5/7/2010

This annotated release presents:

A full summary can be found here.

1/4/2010    The release of our Assembly of Saprolegnia parasitica

Strain Name Coverage Accession Submission Date
S. parasitica CBS 223.65 Draft ADCG01000000 1/4/2010

This release allows:

  • BLAST searches against our genome assemblies
  • Downloads of the consensus sequence and additional files for the genome assembly
  • Search and download a particular region of the genome assembly.