News

2/18/2010    Release of our assembly and annotation of a strain of Ruminococcaceae

The assembled sequences for the following strains have been deposited at DDBJ/EMBL/GenBank:

Strain Name	Coverage	Accession	Submission Date	Total Genes	Annotation Submission Date
R. bacterium D16	34.42x	ADDX01000000	02/18/10	3,259	02/18/10

The assembly release allows:

• BLAST searches against our genome assemblies
• Downloads of the consensus sequence and additional files for the genome assembly
• Search and download a particular region of the genome assembly.

A full summary can be found here.

The annotated release presents:

• Protein and nucleotide BLAST databases
• Precomputed results of BlastX and HMMer Analyses
• Alternative proteins predicted by various gene callers
• tRNA predictions
• RFam features

A full summary can be found here. Click here for a description of how the gene predictions were generated.

4/15/2009    Release of the results of Automated Annotation of 1 strain of Ruminococcus

Strain Name	Total Genes	Accession	Submission Date
Ruminococcus sp. 5_1_39B_FAA	3,525	ACII01000000	4/15/2009

This annotated release presents:

• Protein and nucleotide BLAST databases
• Precomputed results of BlastX and HMMer Analyses
• Alternative proteins predicted by various gene callers
• tRNA predictions and RFam features

A full summary can be found here.

3/20/2009    Initial Release of our assembly of 1 strain of Ruminococcus

Strain Name	Coverage	Accession	Submission Date
Ruminococcus sp. 5_1_39B_FAA	21.01X	ACII01000000	3/20/2009

This release allows:

• BLAST searches against our genome assemblies
• Downloads of the consensus sequence and additional files for the genome assembly
• Search and download a particular region of the genome assembly.