Neurospora crassa Release 7 Summary Genome Statistics
Genome Coverage
| Coding DNA as % of Total: | 37.6 |
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| Genic DNA as % of Total: | 44.5 |
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| Gene Density: | 1 Gene per 3693.6 bp |
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| CONTIG | EXON | GENE | CODING | NONGENIC | INTRON | NONCODING
|
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| count | 251 | 29434 | 10620 | 10620 | 10775 | 18814 | 29562 |
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| total length (BP) | 39225835 | 14738555 | 17443755 | 14738555 | 21782806 | 2705200 | 24487280 |
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| coverage | 100.0 | 37.6 | 44.5 | 37.6 | 55.5 | 6.9 | 62.5 |
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| GC% | 49.3% | 56.0% | 54.6% | 56.0% | 45.0% | 47.2% | 45.3% |
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| min length | 629 | 1 | 27 | 6 | 5 | 25 | 5 |
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| max length | 1842146 | 15030 | 33235 | 32463 | 49601 | 3780 | 49601 |
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| median length | 16392 | 218 | 1359 | 1140 | 1327 | 87 | 176 |
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| mean length | 156278 | 501 | 1643 | 1388 | 2022 | 144 | 829 |
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Average Positions of Introns within Genes
[ Download tab delimited ]
| Codon | Amino Acid | Count | Usage |
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| Codon | Amino Acid | Count | Usage |
| * | * | 4921052 | 100.00% |
| AAA | K | 59518 | 1.21% |
| AAC | N | 128957 | 2.62% |
| AAG | K | 189651 | 3.85% |
| AAT | N | 52379 | 1.06% |
| ACA | T | 54531 | 1.11% |
| ACC | T | 121581 | 2.47% |
| ACG | T | 68315 | 1.39% |
| ACT | T | 55927 | 1.14% |
| AGA | R | 40178 | 0.82% |
| AGC | S | 86624 | 1.76% |
| AGG | R | 59099 | 1.20% |
| AGT | S | 43934 | 0.89% |
| ATA | I | 21301 | 0.43% |
| ATC | I | 127702 | 2.60% |
| ATG | M | 106265 | 2.16% |
| ATT | I | 68135 | 1.38% |
| CAA | Q | 85019 | 1.73% |
| CAC | H | 72686 | 1.48% |
| CAG | Q | 123895 | 2.52% |
| CAT | H | 48258 | 0.98% |
| CCA | P | 62762 | 1.28% |
| CCC | P | 109535 | 2.23% |
| CCG | P | 73793 | 1.50% |
| CCT | P | 74942 | 1.52% |
| CGA | R | 35509 | 0.72% |
| CGC | R | 84906 | 1.73% |
| CGG | R | 42743 | 0.87% |
| CGT | R | 42055 | 0.85% |
| CTA | L | 30091 | 0.61% |
| CTC | L | 129492 | 2.63% |
| CTG | L | 90823 | 1.85% |
| CTN | | 1 | 0.00% |
| CTT | L | 69951 | 1.42% |
| GAA | E | 112964 | 2.30% |
| GAC | D | 157345 | 3.20% |
| GAG | E | 203381 | 4.13% |
| GAT | D | 118205 | 2.40% |
| GCA | A | 63913 | 1.30% |
| GCC | A | 173680 | 3.53% |
| GCG | A | 86517 | 1.76% |
| GCT | A | 102275 | 2.08% |
| GGA | G | 68868 | 1.40% |
| GGC | G | 140440 | 2.85% |
| GGG | G | 57844 | 1.18% |
| GGN | | 1 | 0.00% |
| GGT | G | 86632 | 1.76% |
| GTA | V | 27899 | 0.57% |
| GTC | V | 119254 | 2.42% |
| GTG | V | 78529 | 1.60% |
| GTN | | 1 | 0.00% |
| GTT | V | 68587 | 1.39% |
| TAA | $ | 3140 | 0.06% |
| TAC | Y | 83818 | 1.70% |
| TAG | $ | 3182 | 0.06% |
| TAT | Y | 42070 | 0.85% |
| TCA | S | 46839 | 0.95% |
| TCC | S | 98641 | 2.00% |
| TCG | S | 72490 | 1.47% |
| TCT | S | 59589 | 1.21% |
| TGA | $ | 4413 | 0.09% |
| TGC | C | 38135 | 0.77% |
| TGG | W | 66972 | 1.36% |
| TGT | C | 18518 | 0.38% |
| TTA | L | 14359 | 0.29% |
| TTC | F | 105400 | 2.14% |
| TTG | L | 76070 | 1.55% |
| TTT | F | 60523 | 1.23% |
| Legend | 0 | 1-6 | 7-10 | 11+ | genes per 25000 BP |
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